STRINGSTRING
ECs1414 ECs1414 ECs1415 ECs1415 ECs1416 ECs1416 ECs1417 ECs1417 ECs1419 ECs1419 ECs1420 ECs1420 ECs1421 ECs1421
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ECs1414Curli production assembly/transport component CsgG; Similar to CSGG_ECOLI gi|1787274 percent identity 100 in 277 aa (Conserved in E.coli K-12). (277 aa)
ECs1415Curli production assembly/transport component CsgF; Similar to CSGF_ECOLI gi|1787275 percent identity 100 in 138 aa (Conserved in E.coli K-12). (138 aa)
ECs1416Curli production assembly/transport component CsgE; Similar to CSGE_ECOLI gi|1787276 percent identity 100 in 129 aa (Conserved in E.coli K-12). (129 aa)
ECs1417Transcriptional regulator for 2nd curli operon; Similar to CSGD_ECOLI gi|1787277 percent identity 99 in 216 aa (Conserved in E.coli K-12). (216 aa)
ECs1419Minor curlin subunit precursor CsgB; Similar to CSGB_ECOLI gi|1787278 percent identity 100 in 151 aa (Conserved in E.coli K-12). (151 aa)
ECs1420Curlin major subunit CsgA; Similar to CSGA_ECOLI gi|1787279 percent identity 96 in 152 aa (Conserved in E.coli K-12). (152 aa)
ECs1421Putative curli production protein CsgC; Similar to CSGC_ECOLI gi|1787280 percent identity 98 in 110 aa (Conserved in E.coli K-12). (110 aa)
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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