STRINGSTRING
ECs4011 ECs4011 ECs5001 ECs5001 ECs4018 ECs4018 ECs2527 ECs2527
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ECs4011N-acetylgalactosamine-specific PTS system enzyme IIB component; Similar to AGAV_ECOLI (strain C) dad|AF228498-3|AAF81083.1 percent identity 98 in 169 aa, similar to AGAV_ECOLI (K-12) gi|1789521 percent identity 98 in 169 aa (Conserved in E.coli K-12). (169 aa)
ECs5001Sorbose-permease IIB component (PTS system), similar to sorbose-permease IIB components e.g. [Klebsiella pneumoniae] gi|1142714|gb|AAB04152.1| percent identity 46 in 162 aa. (164 aa)
ECs4018Galactosamine-specific PTS system enzyme IIB component; Similar to AGAB_ECOLI (strain C) dad|AF228498-10|AAF81090.1 percent identity 99 in 158 aa, similar to AGAB_ECOLI (K-12) gi|1789527 percent identity 99 in 158 aa (Conserved in E.coli K-12). (158 aa)
ECs2527Mannose-specific PTS enzyme IIAB; Similar to MANX_ECOLI gi|1788120 percent identity 99 in 323 aa (Conserved in E.coli K-12). (323 aa)
Your Current Organism:
Escherichia coli O157H7 Sakai
NCBI taxonomy Id: 386585
Other names: E. coli O157:H7 str. Sakai, Escherichia coli O157:H7 str. Sakai, Escherichia coli O157:H7 strain Sakai
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