STRINGSTRING
NIS_0006 NIS_0006 NIS_0010 NIS_0010 NIS_0688 NIS_0688 NIS_0689 NIS_0689 NIS_0690 NIS_0690 mdh mdh NIS_0836 NIS_0836 NIS_0837 NIS_0837 sucC sucC sucD sucD NIS_1640 NIS_1640
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NIS_0006Succinate dehydrogenase/fumarate reductase, flavoprotein subunit. (531 aa)
NIS_0010Succinate dehydrogenase/fumarate reductase, iron-sulfur protein. (234 aa)
NIS_0688Succinate dehydrogenase/fumarate reductase, subunit C. (292 aa)
NIS_0689Succinate dehydrogenase/fumarate reductase, iron-sulfur protein. (318 aa)
NIS_0690Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (571 aa)
mdhMalate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (318 aa)
NIS_0836Fumarate/tartrate hydratase, alpha subunit; EC 4.2.1.32/EC 4.2.1.2, FumA/TtdA. (287 aa)
NIS_0837Fumarate/tartrate hydratase, beta subunit; EC 4.2.1.32/EC 4.2.1.2, FumB/TtdB. (184 aa)
sucCsuccinyl-CoA synthase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (390 aa)
sucDsuccinyl-CoA synthase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
NIS_1640Malate oxidoreductase. (417 aa)
Your Current Organism:
Nitratiruptor sp. SB1552
NCBI taxonomy Id: 387092
Other names: N. sp. SB155-2, Nitratiruptor sp. SB155-2
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