16 items (Lupinus angustifolius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TanjilG_18098	PsbP domain-containing protein. (262 aa)
	TanjilG_22579	PsbP domain-containing protein. (246 aa)
	TanjilG_28639	PsbP domain-containing protein. (241 aa)
	TanjilG_00759	PsbP domain-containing protein. (259 aa)
	TanjilG_29608	PsbP domain-containing protein. (264 aa)
	TanjilG_25946	PsbP domain-containing protein. (288 aa)
	TanjilG_06748	Uncharacterized protein. (198 aa)
	TanjilG_02748	PsbP domain-containing protein. (282 aa)
	TanjilG_29295	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (669 aa)
	TanjilG_11927	PsbP domain-containing protein. (213 aa)
	TanjilG_03720	PsbP domain-containing protein. (235 aa)
	TanjilG_31246	Uncharacterized protein. (198 aa)
	TanjilG_21835	PsbP domain-containing protein. (272 aa)
	TanjilG_13974	Uncharacterized protein. (207 aa)
	TanjilG_05388	PsbP domain-containing protein. (240 aa)
	TanjilG_03583	PsbP domain-containing protein. (273 aa)

Your Current Organism:

Lupinus angustifolius

NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TanjilG_00759	TanjilG_03583	A0A4P1R7D8	A0A1J7GRU1	PsbP domain-containing protein.	PsbP domain-containing protein.	0.480
TanjilG_00759	TanjilG_03720	A0A4P1R7D8	A0A1J7HWN0	PsbP domain-containing protein.	PsbP domain-containing protein.	0.581
TanjilG_00759	TanjilG_05388	A0A4P1R7D8	A0A1J7HPN3	PsbP domain-containing protein.	PsbP domain-containing protein.	0.533
TanjilG_00759	TanjilG_11927	A0A4P1R7D8	A0A1J7HZT3	PsbP domain-containing protein.	PsbP domain-containing protein.	0.943
TanjilG_00759	TanjilG_18098	A0A4P1R7D8	A0A1J7GR52	PsbP domain-containing protein.	PsbP domain-containing protein.	0.672
TanjilG_00759	TanjilG_21835	A0A4P1R7D8	A0A1J7HRX1	PsbP domain-containing protein.	PsbP domain-containing protein.	0.675
TanjilG_00759	TanjilG_22579	A0A4P1R7D8	A0A4P1RT26	PsbP domain-containing protein.	PsbP domain-containing protein.	0.568
TanjilG_00759	TanjilG_28639	A0A4P1R7D8	A0A4P1RP99	PsbP domain-containing protein.	PsbP domain-containing protein.	0.411
TanjilG_00759	TanjilG_29608	A0A4P1R7D8	A0A4P1R5U2	PsbP domain-containing protein.	PsbP domain-containing protein.	0.900
TanjilG_02748	TanjilG_05388	A0A394C7W9	A0A1J7HPN3	PsbP domain-containing protein.	PsbP domain-containing protein.	0.562
TanjilG_02748	TanjilG_18098	A0A394C7W9	A0A1J7GR52	PsbP domain-containing protein.	PsbP domain-containing protein.	0.404
TanjilG_02748	TanjilG_28639	A0A394C7W9	A0A4P1RP99	PsbP domain-containing protein.	PsbP domain-containing protein.	0.539
TanjilG_03583	TanjilG_00759	A0A1J7GRU1	A0A4P1R7D8	PsbP domain-containing protein.	PsbP domain-containing protein.	0.480
TanjilG_03583	TanjilG_03720	A0A1J7GRU1	A0A1J7HWN0	PsbP domain-containing protein.	PsbP domain-containing protein.	0.438
TanjilG_03583	TanjilG_05388	A0A1J7GRU1	A0A1J7HPN3	PsbP domain-containing protein.	PsbP domain-containing protein.	0.414
TanjilG_03583	TanjilG_11927	A0A1J7GRU1	A0A1J7HZT3	PsbP domain-containing protein.	PsbP domain-containing protein.	0.498
TanjilG_03583	TanjilG_18098	A0A1J7GRU1	A0A1J7GR52	PsbP domain-containing protein.	PsbP domain-containing protein.	0.406
TanjilG_03583	TanjilG_21835	A0A1J7GRU1	A0A1J7HRX1	PsbP domain-containing protein.	PsbP domain-containing protein.	0.417
TanjilG_03583	TanjilG_22579	A0A1J7GRU1	A0A4P1RT26	PsbP domain-containing protein.	PsbP domain-containing protein.	0.415
TanjilG_03583	TanjilG_25946	A0A1J7GRU1	A0A394DM74	PsbP domain-containing protein.	PsbP domain-containing protein.	0.480