STRINGSTRING
AGK60038.1 AGK60038.1 AGK60039.1 AGK60039.1 AGK60040.1 AGK60040.1 AGK61270.1 AGK61270.1 AGK61271.1 AGK61271.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGK60038.1Transposase-like protein; PF01797:COG1943; PFAM: TransposaseIS200like; COG: Transposase and inactivated derivatives. (134 aa)
AGK60039.1PF01934:COG2361; PFAM: ProteinofunknownfunctionDUF86; COG: Uncharacterized conserved protein. (120 aa)
AGK60040.1PF01909:COG1669; PFAM: Nucleotidyltransferasedomain; COG: Predicted nucleotidyltransferases. (107 aa)
AGK61270.1Putative methyltransferase, YaeB/AF_0241 family; PF01980:TIGR00104:COG1720; PFAM: UncharacterisedproteinfamilyUPF0066; COG: Uncharacterized conserved protein; TIGR: putative methyltransferase, YaeB/AF_0241 family. (161 aa)
AGK61271.1PF01909:COG1669; PFAM: Nucleotidyltransferasedomain; COG: Predicted nucleotidyltransferases. (102 aa)
Your Current Organism:
Archaeoglobus sulfaticallidus
NCBI taxonomy Id: 387631
Other names: A. sulfaticallidus PM70-1, Archaeoglobus sp. PM70-1, Archaeoglobus sulfaticallidus PM70-1
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