STRINGSTRING
ENSGAGP00000003098 ENSGAGP00000003098 ENSGAGP00000012284 ENSGAGP00000012284 DHX15 DHX15 U2SURP U2SURP GPATCH2L GPATCH2L PUF60 PUF60 CHERP CHERP ENSGAGP00000022051 ENSGAGP00000022051 RBM17 RBM17 TM6SF2 TM6SF2 SMNDC1 SMNDC1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSGAGP00000003098Uncharacterized protein. (166 aa)
ENSGAGP00000012284Uncharacterized protein. (168 aa)
DHX15DEAH-box helicase 15. (766 aa)
U2SURPU2 snRNP associated SURP domain containing. (948 aa)
GPATCH2LG-patch domain containing 2 like. (530 aa)
PUF60Poly(U) binding splicing factor 60. (568 aa)
CHERPCalcium homeostasis endoplasmic reticulum protein. (909 aa)
ENSGAGP00000022051Uncharacterized protein. (707 aa)
RBM17RNA binding motif protein 17. (402 aa)
TM6SF2Transmembrane 6 superfamily member 2. (379 aa)
SMNDC1Survival motor neuron domain containing 1. (238 aa)
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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