STRINGSTRING
RBBP6 RBBP6 CPSF2 CPSF2 CPSF1 CPSF1 WDR33 WDR33 CPSF3 CPSF3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RBBP6RB binding protein 6, ubiquitin ligase. (1775 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (783 aa)
CPSF1Cleavage and polyadenylation specific factor 1. (1435 aa)
WDR33WD repeat domain 33. (1319 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (503 aa)
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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