STRINGSTRING
NPLOC4 NPLOC4 VCP VCP FAF1 FAF1 NSFL1C NSFL1C UFD1 UFD1 UBXN7 UBXN7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NPLOC4NPL4 homolog, ubiquitin recognition factor. (628 aa)
VCPValosin containing protein; Belongs to the AAA ATPase family. (761 aa)
FAF1Fas associated factor 1. (650 aa)
NSFL1CNSFL1 cofactor. (369 aa)
UFD1Ubiquitin recognition factor in ER associated degradation 1. (307 aa)
UBXN7UBX domain-containing protein 7. (511 aa)
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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