(27 nodes) Structural constituent of nuclear pore network (Gopherus agassizii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NUP205	Nucleoporin 205. (2032 aa)
	NUP210L	Nucleoporin 210 like. (1736 aa)
	ENSGAGP00000010918	BIG2 domain-containing protein. (465 aa)
	ENSGAGP00000023252	Uncharacterized protein. (979 aa)
	ENSGAGP00000010909	Uncharacterized protein. (286 aa)
	NUP160	Nucleoporin 160. (1386 aa)
	NUP62	Nucleoporin 62. (570 aa)
	ENSGAGP00000019023	Uncharacterized protein. (341 aa)
	ENSGAGP00000018626	Uncharacterized protein. (173 aa)
	NUTF2	Nuclear transport factor 2. (127 aa)
	TPR	Translocated promoter region, nuclear basket protein. (2457 aa)
	NUP93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
	NUP85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (650 aa)
	NUP153	Nucleoporin 153. (1466 aa)
	ENSGAGP00000029157	Uncharacterized protein. (1721 aa)
	ENSGAGP00000028196	NTF2 domain-containing protein. (127 aa)
	NUP54	Nucleoporin 54. (554 aa)
	NUP107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (919 aa)
	NUP98	Nucleoporin 98. (1802 aa)
	NUP35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (311 aa)
	ENSGAGP00000002587	Uncharacterized protein. (353 aa)
	NUP155	Nucleoporin 155. (1389 aa)
	FANCA	FA complementation group A. (1444 aa)
	ENSGAGP00000004246	Uncharacterized protein. (496 aa)
	NUP88	Nucleoporin 88. (722 aa)
	NUP214	Nucleoporin 214. (2106 aa)
	ENSGAGP00000016329	Uncharacterized protein. (282 aa)

Your Current Organism:

Gopherus agassizii

NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGAGP00000002587	ENSGAGP00000004246	ENSGAGP00000002587	ENSGAGP00000004246	Uncharacterized protein.	Uncharacterized protein.	0.754
ENSGAGP00000002587	ENSGAGP00000010909	ENSGAGP00000002587	ENSGAGP00000010909	Uncharacterized protein.	Uncharacterized protein.	0.863
ENSGAGP00000002587	ENSGAGP00000010918	ENSGAGP00000002587	ENSGAGP00000010918	Uncharacterized protein.	BIG2 domain-containing protein.	0.863
ENSGAGP00000002587	ENSGAGP00000016329	ENSGAGP00000002587	ENSGAGP00000016329	Uncharacterized protein.	Uncharacterized protein.	0.940
ENSGAGP00000002587	ENSGAGP00000018626	ENSGAGP00000002587	ENSGAGP00000018626	Uncharacterized protein.	Uncharacterized protein.	0.754
ENSGAGP00000002587	ENSGAGP00000019023	ENSGAGP00000002587	ENSGAGP00000019023	Uncharacterized protein.	Uncharacterized protein.	0.754
ENSGAGP00000002587	ENSGAGP00000029157	ENSGAGP00000002587	ENSGAGP00000029157	Uncharacterized protein.	Uncharacterized protein.	0.982
ENSGAGP00000002587	NUP107	ENSGAGP00000002587	ENSGAGP00000023332	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.965
ENSGAGP00000002587	NUP153	ENSGAGP00000002587	ENSGAGP00000031161	Uncharacterized protein.	Nucleoporin 153.	0.840
ENSGAGP00000002587	NUP155	ENSGAGP00000002587	ENSGAGP00000002709	Uncharacterized protein.	Nucleoporin 155.	0.987
ENSGAGP00000002587	NUP160	ENSGAGP00000002587	ENSGAGP00000021559	Uncharacterized protein.	Nucleoporin 160.	0.927
ENSGAGP00000002587	NUP205	ENSGAGP00000002587	ENSGAGP00000014897	Uncharacterized protein.	Nucleoporin 205.	0.974
ENSGAGP00000002587	NUP210L	ENSGAGP00000002587	ENSGAGP00000014236	Uncharacterized protein.	Nucleoporin 210 like.	0.863
ENSGAGP00000002587	NUP214	ENSGAGP00000002587	ENSGAGP00000016492	Uncharacterized protein.	Nucleoporin 214.	0.940
ENSGAGP00000002587	NUP35	ENSGAGP00000002587	ENSGAGP00000002424	Uncharacterized protein.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.982
ENSGAGP00000002587	NUP54	ENSGAGP00000002587	ENSGAGP00000026920	Uncharacterized protein.	Nucleoporin 54.	0.969
ENSGAGP00000002587	NUP62	ENSGAGP00000002587	ENSGAGP00000020441	Uncharacterized protein.	Nucleoporin 62.	0.911
ENSGAGP00000002587	NUP85	ENSGAGP00000002587	ENSGAGP00000031495	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.960
ENSGAGP00000002587	NUP88	ENSGAGP00000002587	ENSGAGP00000018133	Uncharacterized protein.	Nucleoporin 88.	0.952
ENSGAGP00000002587	NUP93	ENSGAGP00000002587	ENSGAGP00000033574	Uncharacterized protein.	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.994