(4 nodes) Stress granule disassembly network (Gopherus agassizii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSGAGP00000015915	Uncharacterized protein; Belongs to the AAA ATPase family. (766 aa)
	ENSGAGP00000029957	Uncharacterized protein. (226 aa)
	ENSGAGP00000029960	Uncharacterized protein. (166 aa)
	VCP	Valosin containing protein; Belongs to the AAA ATPase family. (761 aa)

Your Current Organism:

Gopherus agassizii

NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGAGP00000015915	ENSGAGP00000029957	ENSGAGP00000015915	ENSGAGP00000029957	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.685
ENSGAGP00000015915	ENSGAGP00000029960	ENSGAGP00000015915	ENSGAGP00000029960	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.685
ENSGAGP00000015915	VCP	ENSGAGP00000015915	ENSGAGP00000015364	Uncharacterized protein; Belongs to the AAA ATPase family.	Valosin containing protein; Belongs to the AAA ATPase family.	0.799
ENSGAGP00000029957	ENSGAGP00000015915	ENSGAGP00000029957	ENSGAGP00000015915	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.685
ENSGAGP00000029957	ENSGAGP00000029960	ENSGAGP00000029957	ENSGAGP00000029960	Uncharacterized protein.	Uncharacterized protein.	0.735
ENSGAGP00000029957	VCP	ENSGAGP00000029957	ENSGAGP00000015364	Uncharacterized protein.	Valosin containing protein; Belongs to the AAA ATPase family.	0.732
ENSGAGP00000029960	ENSGAGP00000015915	ENSGAGP00000029960	ENSGAGP00000015915	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.685
ENSGAGP00000029960	ENSGAGP00000029957	ENSGAGP00000029960	ENSGAGP00000029957	Uncharacterized protein.	Uncharacterized protein.	0.735
ENSGAGP00000029960	VCP	ENSGAGP00000029960	ENSGAGP00000015364	Uncharacterized protein.	Valosin containing protein; Belongs to the AAA ATPase family.	0.732
VCP	ENSGAGP00000015915	ENSGAGP00000015364	ENSGAGP00000015915	Valosin containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.799
VCP	ENSGAGP00000029957	ENSGAGP00000015364	ENSGAGP00000029957	Valosin containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.732
VCP	ENSGAGP00000029960	ENSGAGP00000015364	ENSGAGP00000029960	Valosin containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.732