STRINGSTRING
PDCD5 PDCD5 MLLT11 MLLT11 ENSGAGP00000035185 ENSGAGP00000035185 BAK1 BAK1 ENSGAGP00000026310 ENSGAGP00000026310 FAM162A FAM162A BNIP3 BNIP3 ENSGAGP00000036275 ENSGAGP00000036275 ENSGAGP00000000264 ENSGAGP00000000264 ENSGAGP00000000636 ENSGAGP00000000636 TP53 TP53 MMP9 MMP9 CIDEB CIDEB BMF BMF PINK1 PINK1 HRK HRK DNM1L DNM1L GPER1 GPER1 PLA2G6 PLA2G6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDCD5Programmed cell death 5. (145 aa)
MLLT11MLLT11 transcription factor 7 cofactor. (89 aa)
ENSGAGP00000035185Uncharacterized protein. (54 aa)
BAK1BCL2 antagonist/killer 1. (211 aa)
ENSGAGP00000026310Uncharacterized protein. (141 aa)
FAM162AFamily with sequence similarity 162 member A. (140 aa)
BNIP3BCL2 interacting protein 3. (205 aa)
ENSGAGP00000036275Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (705 aa)
ENSGAGP00000000264BH3-interacting domain death agonist; Counters the protective effect of Bcl-2. (188 aa)
ENSGAGP00000000636Uncharacterized protein. (332 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (446 aa)
MMP9Matrix metallopeptidase 9. (710 aa)
CIDEBCell death inducing DFFA like effector b. (215 aa)
BMFBcl2 modifying factor. (192 aa)
PINK1PTEN induced kinase 1. (500 aa)
HRKHarakiri, BCL2 interacting protein. (87 aa)
DNM1LDynamin 1 like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (735 aa)
GPER1G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (358 aa)
PLA2G6Phospholipase A2 group VI. (804 aa)
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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