STRINGSTRING
ATG14 ATG14 CHMP6 CHMP6 ENSGAGP00000002188 ENSGAGP00000002188 MAP1LC3C MAP1LC3C VPS16 VPS16 STX17 STX17 UVRAG UVRAG EPG5 EPG5 LAMP2 LAMP2 VCP VCP ENSGAGP00000015915 ENSGAGP00000015915 SNX14 SNX14 PIK3C3 PIK3C3 TECPR1 TECPR1 VAMP8 VAMP8 SNAP29 SNAP29 ENSGAGP00000022940 ENSGAGP00000022940 MFSD8 MFSD8 ENSGAGP00000027628 ENSGAGP00000027628 ENSGAGP00000029721 ENSGAGP00000029721 PIK3R4 PIK3R4 SNAPIN SNAPIN RUBCNL RUBCNL LIX1L LIX1L VMP1 VMP1 MAP1LC3A MAP1LC3A ENSGAGP00000034578 ENSGAGP00000034578 CHMP5 CHMP5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ATG14Autophagy related 14. (486 aa)
CHMP6Charged multivesicular body protein 6. (197 aa)
ENSGAGP00000002188Uncharacterized protein. (125 aa)
MAP1LC3CMicrotubule associated protein 1 light chain 3 gamma. (135 aa)
VPS16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (815 aa)
STX17Syntaxin 17. (305 aa)
UVRAGUV radiation resistance associated. (631 aa)
EPG5Ectopic P-granules autophagy protein 5 homolog. (2602 aa)
LAMP2Lysosomal associated membrane protein 2. (430 aa)
VCPValosin containing protein; Belongs to the AAA ATPase family. (761 aa)
ENSGAGP00000015915Uncharacterized protein; Belongs to the AAA ATPase family. (766 aa)
SNX14Sorting nexin 14. (948 aa)
PIK3C3Phosphatidylinositol 3-kinase catalytic subunit type 3. (870 aa)
TECPR1Tectonin beta-propeller repeat containing 1. (1206 aa)
VAMP8Vesicle associated membrane protein 8. (102 aa)
SNAP29Synaptosome associated protein 29. (264 aa)
ENSGAGP00000022940Uncharacterized protein. (202 aa)
MFSD8Major facilitator superfamily domain containing 8. (529 aa)
ENSGAGP00000027628Uncharacterized protein. (220 aa)
ENSGAGP00000029721Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (604 aa)
PIK3R4Phosphoinositide-3-kinase regulatory subunit 4. (1178 aa)
SNAPINSNARE-associated protein Snapin; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. Plays a role in intracellular vesicle trafficking and synaptic vesicle recycling; Belongs to t [...] (132 aa)
RUBCNLRubicon like autophagy enhancer. (774 aa)
LIX1LLimb and CNS expressed 1 like. (228 aa)
VMP1Vacuole membrane protein 1. (406 aa)
MAP1LC3AMicrotubule associated protein 1 light chain 3 alpha. (152 aa)
ENSGAGP00000034578Uncharacterized protein. (68 aa)
CHMP5Charged multivesicular body protein 5. (207 aa)
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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