(40 nodes) Phototransduction network (Gopherus agassizii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GUCA1C	Guanylate cyclase activator 1C. (201 aa)
	MORC1	MORC family CW-type zinc finger 1. (511 aa)
	GRK7	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (613 aa)
	ENSGAGP00000034403	DEP domain-containing protein. (193 aa)
	ENSGAGP00000034401	RGS domain-containing protein. (494 aa)
	SLC24A2	Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (660 aa)
	ENSGAGP00000031727	Uncharacterized protein; Belongs to the calmodulin family. (178 aa)
	SLC24A1	Solute carrier family 24 member 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (673 aa)
	CNGB1	Cyclic nucleotide gated channel subunit beta 1. (837 aa)
	ENSGAGP00000027095	Phosphodiesterase. (751 aa)
	ENSGAGP00000025632	Rhodopsin. (355 aa)
	GUCY2D	Guanylate cyclase. (578 aa)
	ENSGAGP00000024179	Uncharacterized protein. (130 aa)
	RHO	Rhodopsin. (352 aa)
	ENSGAGP00000023811	annotation not available (149 aa)
	CALM1	Calmodulin 1; Belongs to the calmodulin family. (149 aa)
	CALML6	Calmodulin like 6. (156 aa)
	RCVRN	Recoverin. (192 aa)
	CNGA1	Cyclic nucleotide gated channel subunit alpha 1. (517 aa)
	ENSGAGP00000016145	Uncharacterized protein; Belongs to the calmodulin family. (163 aa)
	CALML4	Calmodulin like 4. (153 aa)
	GNB2	G protein subunit beta 2. (352 aa)
	PVALEF	Parvalbumin like EF-hand containing. (134 aa)
	GNAT2	G protein subunit alpha transducin 2. (354 aa)
	CNTROB	Centrobin, centriole duplication and spindle assembly protein. (624 aa)
	PDE6G	Phosphodiesterase 6G. (87 aa)
	GNB1	WD_REPEATS_REGION domain-containing protein. (307 aa)
	ENSGAGP00000007305	WD_REPEATS_REGION domain-containing protein. (68 aa)
	ENSGAGP00000006427	PDEase domain-containing protein. (145 aa)
	GNAT3	G protein subunit alpha transducin 3. (342 aa)
	ENSGAGP00000005622	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (231 aa)
	ENSGAGP00000005263	Uncharacterized protein. (324 aa)
	GUCA1B	Guanylate cyclase activator 1B. (198 aa)
	ENSGAGP00000003646	Uncharacterized protein. (199 aa)
	ENSGAGP00000003443	EF-hand domain-containing protein; Belongs to the calmodulin family. (79 aa)
	ENSGAGP00000003418	Uncharacterized protein; Belongs to the calmodulin family. (140 aa)
	TMCO3	Transmembrane and coiled-coil domains 3. (678 aa)
	GNAT1	G protein subunit alpha transducin 1. (350 aa)
	CALM3	Calmodulin 3; Belongs to the calmodulin family. (217 aa)
	SAG	S-antigen visual arrestin. (434 aa)

Your Current Organism:

Gopherus agassizii

NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CALM1	CALML4	ENSGAGP00000023484	ENSGAGP00000013887	Calmodulin 1; Belongs to the calmodulin family.	Calmodulin like 4.	0.643
CALM1	CALML6	ENSGAGP00000023484	ENSGAGP00000023292	Calmodulin 1; Belongs to the calmodulin family.	Calmodulin like 6.	0.661
CALM1	CNGA1	ENSGAGP00000023484	ENSGAGP00000022196	Calmodulin 1; Belongs to the calmodulin family.	Cyclic nucleotide gated channel subunit alpha 1.	0.656
CALM1	CNGB1	ENSGAGP00000023484	ENSGAGP00000028210	Calmodulin 1; Belongs to the calmodulin family.	Cyclic nucleotide gated channel subunit beta 1.	0.795
CALM1	ENSGAGP00000003646	ENSGAGP00000023484	ENSGAGP00000003646	Calmodulin 1; Belongs to the calmodulin family.	Uncharacterized protein.	0.469
CALM1	ENSGAGP00000005263	ENSGAGP00000023484	ENSGAGP00000005263	Calmodulin 1; Belongs to the calmodulin family.	Uncharacterized protein.	0.510
CALM1	ENSGAGP00000005622	ENSGAGP00000023484	ENSGAGP00000005622	Calmodulin 1; Belongs to the calmodulin family.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.510
CALM1	ENSGAGP00000024179	ENSGAGP00000023484	ENSGAGP00000024179	Calmodulin 1; Belongs to the calmodulin family.	Uncharacterized protein.	0.469
CALM1	GRK7	ENSGAGP00000023484	ENSGAGP00000034943	Calmodulin 1; Belongs to the calmodulin family.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.473
CALM1	GUCA1B	ENSGAGP00000023484	ENSGAGP00000003650	Calmodulin 1; Belongs to the calmodulin family.	Guanylate cyclase activator 1B.	0.469
CALM1	GUCA1C	ENSGAGP00000023484	ENSGAGP00000018496	Calmodulin 1; Belongs to the calmodulin family.	Guanylate cyclase activator 1C.	0.469
CALM1	RCVRN	ENSGAGP00000023484	ENSGAGP00000023071	Calmodulin 1; Belongs to the calmodulin family.	Recoverin.	0.469
CALM3	CALML4	ENSGAGP00000001979	ENSGAGP00000013887	Calmodulin 3; Belongs to the calmodulin family.	Calmodulin like 4.	0.645
CALM3	CALML6	ENSGAGP00000001979	ENSGAGP00000023292	Calmodulin 3; Belongs to the calmodulin family.	Calmodulin like 6.	0.661
CALM3	CNGA1	ENSGAGP00000001979	ENSGAGP00000022196	Calmodulin 3; Belongs to the calmodulin family.	Cyclic nucleotide gated channel subunit alpha 1.	0.656
CALM3	CNGB1	ENSGAGP00000001979	ENSGAGP00000028210	Calmodulin 3; Belongs to the calmodulin family.	Cyclic nucleotide gated channel subunit beta 1.	0.795
CALM3	ENSGAGP00000003646	ENSGAGP00000001979	ENSGAGP00000003646	Calmodulin 3; Belongs to the calmodulin family.	Uncharacterized protein.	0.469
CALM3	ENSGAGP00000005263	ENSGAGP00000001979	ENSGAGP00000005263	Calmodulin 3; Belongs to the calmodulin family.	Uncharacterized protein.	0.510
CALM3	ENSGAGP00000005622	ENSGAGP00000001979	ENSGAGP00000005622	Calmodulin 3; Belongs to the calmodulin family.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.510
CALM3	ENSGAGP00000024179	ENSGAGP00000001979	ENSGAGP00000024179	Calmodulin 3; Belongs to the calmodulin family.	Uncharacterized protein.	0.469