14 items (Medicago truncatula) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A072UBM6	Transcription factor TFIID protein. (242 aa)
	A0A072UID4	Transcription factor TFIID protein. (205 aa)
	A0A072USQ0	TATA-box-binding protein. (133 aa)
	A0A072UXT0	TATA-box-binding protein. (236 aa)
	A0A072UYU3	TATA-box-binding protein. (211 aa)
	G7IM09_MEDTR	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (501 aa)
	G7J040_MEDTR	Putative transcription factor Hap3/NF-YB family. (510 aa)
	G7JA67_MEDTR	Transcription initiation factor TFIID subunit-like protein. (200 aa)
	G7JNZ0_MEDTR	Transcription factor TFIID protein. (162 aa)
	G7K0H6_MEDTR	Nucleotide excision repair, TFIIH, subunit TTDA protein. (133 aa)
	G7K0H7_MEDTR	Nucleotide excision repair, TFIIH, subunit TTDA protein. (70 aa)
	G7K6S4_MEDTR	Transcription initiation factor TFIID protein, putative. (1902 aa)
	G7KXV7_MEDTR	Transcription initiation factor TFIID subunit-like protein. (562 aa)
	Q2HT28_MEDTR	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (536 aa)

Your Current Organism:

Medicago truncatula

NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A072UBM6	G7IM09_MEDTR	A0A072UBM6	G7IM09	Transcription factor TFIID protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.905
A0A072UBM6	G7J040_MEDTR	A0A072UBM6	G7J040	Transcription factor TFIID protein.	Putative transcription factor Hap3/NF-YB family.	0.924
A0A072UBM6	G7JA67_MEDTR	A0A072UBM6	G7JA67	Transcription factor TFIID protein.	Transcription initiation factor TFIID subunit-like protein.	0.965
A0A072UBM6	G7K0H6_MEDTR	A0A072UBM6	G7K0H6	Transcription factor TFIID protein.	Nucleotide excision repair, TFIIH, subunit TTDA protein.	0.697
A0A072UBM6	G7K0H7_MEDTR	A0A072UBM6	G7K0H7	Transcription factor TFIID protein.	Nucleotide excision repair, TFIIH, subunit TTDA protein.	0.697
A0A072UBM6	G7K6S4_MEDTR	A0A072UBM6	G7K6S4	Transcription factor TFIID protein.	Transcription initiation factor TFIID protein, putative.	0.965
A0A072UBM6	G7KXV7_MEDTR	A0A072UBM6	G7KXV7	Transcription factor TFIID protein.	Transcription initiation factor TFIID subunit-like protein.	0.924
A0A072UBM6	Q2HT28_MEDTR	A0A072UBM6	Q2HT28	Transcription factor TFIID protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.905
A0A072UID4	G7IM09_MEDTR	A0A072UID4	G7IM09	Transcription factor TFIID protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.905
A0A072UID4	G7J040_MEDTR	A0A072UID4	G7J040	Transcription factor TFIID protein.	Putative transcription factor Hap3/NF-YB family.	0.924
A0A072UID4	G7JA67_MEDTR	A0A072UID4	G7JA67	Transcription factor TFIID protein.	Transcription initiation factor TFIID subunit-like protein.	0.965
A0A072UID4	G7K0H6_MEDTR	A0A072UID4	G7K0H6	Transcription factor TFIID protein.	Nucleotide excision repair, TFIIH, subunit TTDA protein.	0.697
A0A072UID4	G7K0H7_MEDTR	A0A072UID4	G7K0H7	Transcription factor TFIID protein.	Nucleotide excision repair, TFIIH, subunit TTDA protein.	0.697
A0A072UID4	G7K6S4_MEDTR	A0A072UID4	G7K6S4	Transcription factor TFIID protein.	Transcription initiation factor TFIID protein, putative.	0.965
A0A072UID4	G7KXV7_MEDTR	A0A072UID4	G7KXV7	Transcription factor TFIID protein.	Transcription initiation factor TFIID subunit-like protein.	0.924
A0A072UID4	Q2HT28_MEDTR	A0A072UID4	Q2HT28	Transcription factor TFIID protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.905
A0A072USQ0	G7IM09_MEDTR	A0A072USQ0	G7IM09	TATA-box-binding protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.905
A0A072USQ0	G7J040_MEDTR	A0A072USQ0	G7J040	TATA-box-binding protein.	Putative transcription factor Hap3/NF-YB family.	0.924
A0A072USQ0	G7JA67_MEDTR	A0A072USQ0	G7JA67	TATA-box-binding protein.	Transcription initiation factor TFIID subunit-like protein.	0.965
A0A072USQ0	G7K0H6_MEDTR	A0A072USQ0	G7K0H6	TATA-box-binding protein.	Nucleotide excision repair, TFIIH, subunit TTDA protein.	0.697