(4 nodes) deNEDDylase activity network (Medicago truncatula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A072TLT7	JAB1/Mov34/MPN/PAD-1 ubiquitin protease. (66 aa)
	A0A072TWD2	COP9 signalosome complex subunit 5a-like protein. (77 aa)
	G7JCC9_MEDTR	Putative proteasome endopeptidase complex. (357 aa)
	G7JRH9_MEDTR	Ulp1 protease family, carboxy-terminal domain protein. (236 aa)

Your Current Organism:

Medicago truncatula

NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A072TLT7	G7JCC9_MEDTR	A0A072TLT7	G7JCC9	JAB1/Mov34/MPN/PAD-1 ubiquitin protease.	Putative proteasome endopeptidase complex.	0.546
A0A072TLT7	G7JRH9_MEDTR	A0A072TLT7	G7JRH9	JAB1/Mov34/MPN/PAD-1 ubiquitin protease.	Ulp1 protease family, carboxy-terminal domain protein.	0.435
A0A072TWD2	G7JRH9_MEDTR	A0A072TWD2	G7JRH9	COP9 signalosome complex subunit 5a-like protein.	Ulp1 protease family, carboxy-terminal domain protein.	0.435
G7JCC9_MEDTR	A0A072TLT7	G7JCC9	A0A072TLT7	Putative proteasome endopeptidase complex.	JAB1/Mov34/MPN/PAD-1 ubiquitin protease.	0.546
G7JCC9_MEDTR	G7JRH9_MEDTR	G7JCC9	G7JRH9	Putative proteasome endopeptidase complex.	Ulp1 protease family, carboxy-terminal domain protein.	0.435
G7JRH9_MEDTR	A0A072TLT7	G7JRH9	A0A072TLT7	Ulp1 protease family, carboxy-terminal domain protein.	JAB1/Mov34/MPN/PAD-1 ubiquitin protease.	0.435
G7JRH9_MEDTR	A0A072TWD2	G7JRH9	A0A072TWD2	Ulp1 protease family, carboxy-terminal domain protein.	COP9 signalosome complex subunit 5a-like protein.	0.435
G7JRH9_MEDTR	G7JCC9_MEDTR	G7JRH9	G7JCC9	Ulp1 protease family, carboxy-terminal domain protein.	Putative proteasome endopeptidase complex.	0.435