STRINGSTRING
I3SQE6_MEDTR I3SQE6_MEDTR G7ZZ57_MEDTR G7ZZ57_MEDTR G7ZW00_MEDTR G7ZW00_MEDTR G7LIU5_MEDTR G7LIU5_MEDTR G7LDI5_MEDTR G7LDI5_MEDTR G7LD93_MEDTR G7LD93_MEDTR G7LCC6_MEDTR G7LCC6_MEDTR G7LC93_MEDTR G7LC93_MEDTR G7LBH7_MEDTR G7LBH7_MEDTR G7LBD3_MEDTR G7LBD3_MEDTR G7L6K1_MEDTR G7L6K1_MEDTR G7L2W5_MEDTR G7L2W5_MEDTR G7L0U8_MEDTR G7L0U8_MEDTR G7L0J5_MEDTR G7L0J5_MEDTR G7KW95_MEDTR G7KW95_MEDTR G7KVE8_MEDTR G7KVE8_MEDTR G7KQV7_MEDTR G7KQV7_MEDTR G7KQ16_MEDTR G7KQ16_MEDTR G7KIK4_MEDTR G7KIK4_MEDTR G7KEQ3_MEDTR G7KEQ3_MEDTR G7KEL0_MEDTR G7KEL0_MEDTR G7KEK3_MEDTR G7KEK3_MEDTR G7KAM6_MEDTR G7KAM6_MEDTR A0A072V5D5 A0A072V5D5 A0A072V6V4 A0A072V6V4 A0A072V6Z3 A0A072V6Z3 A0A072V7A8 A0A072V7A8 A0A072VAB3 A0A072VAB3 A0A072VAN2 A0A072VAN2 A0A072VDW1 A0A072VDW1 A0A072VFE9 A0A072VFE9 A0A072VRJ1 A0A072VRJ1 A0A072VS66 A0A072VS66 A0A072VVA3 A0A072VVA3 A2Q483_MEDTR A2Q483_MEDTR B7FGH6_MEDTR B7FGH6_MEDTR B7FGI3_MEDTR B7FGI3_MEDTR B7FMR6_MEDTR B7FMR6_MEDTR G7I2L6_MEDTR G7I2L6_MEDTR G7I6D1_MEDTR G7I6D1_MEDTR G7I6I2_MEDTR G7I6I2_MEDTR G7IE98_MEDTR G7IE98_MEDTR G7IEE2_MEDTR G7IEE2_MEDTR G7II78_MEDTR G7II78_MEDTR G7IIY4_MEDTR G7IIY4_MEDTR G7IKP7_MEDTR G7IKP7_MEDTR G7ILD9_MEDTR G7ILD9_MEDTR G7ILR4_MEDTR G7ILR4_MEDTR G7IPK0_MEDTR G7IPK0_MEDTR G7IPK2_MEDTR G7IPK2_MEDTR G7IPR0_MEDTR G7IPR0_MEDTR G7IPV8_MEDTR G7IPV8_MEDTR G7IVN3_MEDTR G7IVN3_MEDTR G7IWA0_MEDTR G7IWA0_MEDTR G7J399_MEDTR G7J399_MEDTR G7J609_MEDTR G7J609_MEDTR G7JHJ2_MEDTR G7JHJ2_MEDTR G7JHS5_MEDTR G7JHS5_MEDTR G7JIW9_MEDTR G7JIW9_MEDTR G7JJ45_MEDTR G7JJ45_MEDTR G7JS91_MEDTR G7JS91_MEDTR G7JVF0_MEDTR G7JVF0_MEDTR G7K2I6_MEDTR G7K2I6_MEDTR G7K3F8_MEDTR G7K3F8_MEDTR G7K4N4_MEDTR G7K4N4_MEDTR G7K505_MEDTR G7K505_MEDTR A0A072TKY3 A0A072TKY3 A0A072TPA1 A0A072TPA1 A0A072TSQ6 A0A072TSQ6 A0A072TWV3 A0A072TWV3 A0A072U0R3 A0A072U0R3 A0A072U147 A0A072U147 A0A072UA59 A0A072UA59 A0A072UD03 A0A072UD03 A0A072UP05 A0A072UP05 A0A072URE7 A0A072URE7 A0A072US41 A0A072US41 A0A072UUE3 A0A072UUE3 A0A072UW40 A0A072UW40 G7K6W1_MEDTR G7K6W1_MEDTR A0A072V0M7 A0A072V0M7 Q2HU86_MEDTR Q2HU86_MEDTR Q2HTF4_MEDTR Q2HTF4_MEDTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I3SQE6_MEDTRSmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (115 aa)
G7ZZ57_MEDTRPutative transcription factor interactor and regulator CCHC(Zn) family. (543 aa)
G7ZW00_MEDTRPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (160 aa)
G7LIU5_MEDTRPutative transcription factor WD40-like family. (511 aa)
G7LDI5_MEDTRPre-mRNA-processing-splicing factor 8. (2337 aa)
G7LD93_MEDTRBreast carcinoma amplified sequence protein, putative. (261 aa)
G7LCC6_MEDTRSWAP (Suppressor-of-white-APricot)/surp domain protein. (804 aa)
G7LC93_MEDTRMAP kinase organizer 1. (330 aa)
G7LBH7_MEDTRSmall nuclear ribonucleoprotein Sm D2. (124 aa)
G7LBD3_MEDTRSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (131 aa)
G7L6K1_MEDTRCrooked neck protein, putative. (111 aa)
G7L2W5_MEDTRSplicing factor, putative. (61 aa)
G7L0U8_MEDTRSmall nuclear ribonucleoprotein. (75 aa)
G7L0J5_MEDTRU5 small nuclear ribonucleoprotein 40 kDa-like protein. (345 aa)
G7KW95_MEDTRPre-mRNA-splicing factor CWC22-like protein. (455 aa)
G7KVE8_MEDTRPre-mRNA-splicing factor CWC22-like protein. (241 aa)
G7KQV7_MEDTRSm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
G7KQ16_MEDTRDEAD-box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (666 aa)
G7KIK4_MEDTRPutative tetratricopeptide-like helical domain-containing protein. (695 aa)
G7KEQ3_MEDTRPutative nuclear protein DGCR14. (510 aa)
G7KEL0_MEDTRSmall nuclear ribonucleoprotein Sm D2. (159 aa)
G7KEK3_MEDTRUncharacterized protein. (106 aa)
G7KAM6_MEDTRPutative tetratricopeptide-like helical domain-containing protein. (693 aa)
A0A072V5D5PP1/PP2A phosphatase pleiotropic regulator PRL1. (480 aa)
A0A072V6V4Pre-mRNA-splicing factor SYF1, putative. (125 aa)
A0A072V6Z3DEAD-box ATP-dependent RNA helicase. (406 aa)
A0A072V7A8Uncharacterized protein. (140 aa)
A0A072VAB3Putative peptidylprolyl isomerase transcription factor WD40-like family. (617 aa)
A0A072VAN2Uncharacterized protein. (240 aa)
A0A072VDW1ATP-dependent RNA helicase DHX8. (1223 aa)
A0A072VFE9Peptidyl-prolyl cis-trans isomerase. (545 aa)
A0A072VRJ1Pre-mRNA-splicing factor syf2, putative. (308 aa)
A0A072VS66P-loop nucleoside triphosphate hydrolase superfamily protein. (1545 aa)
A0A072VVA3Pre-mRNA-processing-splicing factor 8. (241 aa)
A2Q483_MEDTRProtein interaction regulator family protein. (424 aa)
B7FGH6_MEDTRPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (164 aa)
B7FGI3_MEDTRPutative nucleotide-binding alpha-beta plait domain-containing protein. (124 aa)
B7FMR6_MEDTRUbiquitin family protein. (244 aa)
G7I2L6_MEDTRPre-mRNA splicing factor. (567 aa)
G7I6D1_MEDTRPutative PRP1 splicing factor, tetratricopeptide-like helical domain-containing protein. (895 aa)
G7I6I2_MEDTRPutative RNA helicase. (277 aa)
G7IE98_MEDTRATP-dependent RNA helicase DHX8. (1154 aa)
G7IEE2_MEDTRSmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
G7II78_MEDTRPutative JAB1/MPN/MOV34 metalloenzyme domain, ribonuclease H-like domain, PRO8NT. (2356 aa)
G7IIY4_MEDTREndoplasmic reticulum protein ERp29, carboxy-terminal domain protein. (133 aa)
G7IKP7_MEDTRPre-mRNA-processing-splicing factor. (827 aa)
G7ILD9_MEDTRPutative tetratricopeptide-like helical domain-containing protein. (925 aa)
G7ILR4_MEDTRUbiquitin-specific protease family C19 protein. (428 aa)
G7IPK0_MEDTRSplicing factor 3B subunit, putative. (91 aa)
G7IPK2_MEDTRSplicing factor 3B subunit 1. (1378 aa)
G7IPR0_MEDTRSplicing factor 3B subunit 2. (578 aa)
G7IPV8_MEDTRPP1/PP2A phosphatase pleiotropic regulator PRL1. (274 aa)
G7IVN3_MEDTRUbiquitin family protein. (240 aa)
G7IWA0_MEDTRPre-mRNA-splicing factor CWC22-like protein, putative. (101 aa)
G7J399_MEDTRPutative transcription factor WD40-like family. (517 aa)
G7J609_MEDTRPutative transcription factor C3H family. (492 aa)
G7JHJ2_MEDTRU6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
G7JHS5_MEDTRElongation factor EF-Tu-like protein. (988 aa)
G7JIW9_MEDTRPutative pre-mRNA-splicing factor Cwf15/Cwc15. (227 aa)
G7JJ45_MEDTRPutative tetratricopeptide-like helical domain-containing protein. (423 aa)
G7JS91_MEDTRUncharacterized protein. (145 aa)
G7JVF0_MEDTRPutative sm-like protein Lsm6/SmF. (88 aa)
G7K2I6_MEDTRPeptidyl-prolyl cis-trans isomerase-like protein. (592 aa)
G7K3F8_MEDTRSmall nuclear ribonucleoprotein-associated protein. (276 aa)
G7K4N4_MEDTRPre-mRNA-splicing factor ISY1. (303 aa)
G7K505_MEDTRPROCT (NUC072) domain protein. (160 aa)
A0A072TKY3Pre-mRNA-processing-splicing factor. (222 aa)
A0A072TPA1Uncharacterized protein. (95 aa)
A0A072TSQ6Small nuclear ribonucleoprotein-associated protein. (269 aa)
A0A072TWV3Putative Zinc finger, U1-type, SF3A2 domain-containing protein. (324 aa)
A0A072U0R3Splicing factor 3A, protein. (427 aa)
A0A072U147Putative PRP1 splicing factor, tetratricopeptide-like helical domain-containing protein. (1054 aa)
A0A072UA59Small nuclear ribonucleoprotein G. (82 aa)
A0A072UD03Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
A0A072UP05Splicing factor 3B subunit 2. (579 aa)
A0A072URE7Putative tetratricopeptide-like helical domain-containing protein. (433 aa)
A0A072US41Crooked neck protein/cell cycle protein, putative. (161 aa)
A0A072UUE3DEAD-box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (706 aa)
A0A072UW40Putative initiation factor eIF-4 gamma, MA3. (766 aa)
G7K6W1_MEDTRPre-mRNA-splicing factor SYF1. (221 aa)
A0A072V0M7Pre-mRNA splicing factor. (600 aa)
Q2HU86_MEDTRUbiquitin-specific protease family C19 protein, putative. (119 aa)
Q2HTF4_MEDTRSmall nuclear ribonucleoprotein G. (80 aa)
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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