STRINGSTRING
MTR_0776s0010 MTR_0776s0010 dxs2-2 dxs2-2 B7FJJ4_MEDTR B7FJJ4_MEDTR G7IF28_MEDTR G7IF28_MEDTR G7IFK9_MEDTR G7IFK9_MEDTR G7J483_MEDTR G7J483_MEDTR G7JBM5_MEDTR G7JBM5_MEDTR G7JEN5_MEDTR G7JEN5_MEDTR G7JJ14_MEDTR G7JJ14_MEDTR G7JTF7_MEDTR G7JTF7_MEDTR dxs2 dxs2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MTR_0776s0010Transketolase 1, thiamin-binding protein. (1918 aa)
dxs2-2Putative 1-deoxy-D-xylulose-5-phosphate synthase. (710 aa)
B7FJJ4_MEDTRPyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (361 aa)
G7IF28_MEDTRPutative transketolase. (735 aa)
G7IFK9_MEDTRPutative 1-deoxy-D-xylulose-5-phosphate synthase. (718 aa)
G7J483_MEDTRPyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (403 aa)
G7JBM5_MEDTRPutative 1-deoxy-D-xylulose-5-phosphate synthase. (708 aa)
G7JEN5_MEDTRPutative transketolase. (735 aa)
G7JJ14_MEDTRPutative 1-deoxy-D-xylulose-5-phosphate synthase. (717 aa)
G7JTF7_MEDTRBranched chain alpha-keto acid dehydrogenase E1 beta subunit. (358 aa)
dxs2Putative 1-deoxy-D-xylulose-5-phosphate synthase. (711 aa)
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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