12 items (Phaseolus vulgaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V7CBN7_PHAVU	Uncharacterized protein. (241 aa)
	V7CYS0_PHAVU	Uncharacterized protein. (399 aa)
	V7B0F7_PHAVU	Uncharacterized protein. (341 aa)
	V7BR60_PHAVU	Uncharacterized protein. (374 aa)
	V7CZQ1_PHAVU	Uncharacterized protein. (359 aa)
	V7BUQ9_PHAVU	Uncharacterized protein. (365 aa)
	V7C9F3_PHAVU	Uncharacterized protein. (242 aa)
	V7CRY8_PHAVU	Uncharacterized protein. (312 aa)
	V7CEJ2_PHAVU	Uncharacterized protein. (247 aa)
	V7CEQ1_PHAVU	Uncharacterized protein. (243 aa)
	V7CM32_PHAVU	Flavokinase domain-containing protein. (377 aa)
	V7CRR7_PHAVU	Uncharacterized protein. (378 aa)

Your Current Organism:

Phaseolus vulgaris

NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V7B0F7_PHAVU	V7CEJ2_PHAVU	V7B0F7	V7CEJ2	Uncharacterized protein.	Uncharacterized protein.	0.484
V7B0F7_PHAVU	V7CEQ1_PHAVU	V7B0F7	V7CEQ1	Uncharacterized protein.	Uncharacterized protein.	0.515
V7B0F7_PHAVU	V7CRR7_PHAVU	V7B0F7	V7CRR7	Uncharacterized protein.	Uncharacterized protein.	0.400
V7BUQ9_PHAVU	V7CM32_PHAVU	V7BUQ9	V7CM32	Uncharacterized protein.	Flavokinase domain-containing protein.	0.918
V7C9F3_PHAVU	V7CBN7_PHAVU	V7C9F3	V7CBN7	Uncharacterized protein.	Uncharacterized protein.	0.901
V7C9F3_PHAVU	V7CEJ2_PHAVU	V7C9F3	V7CEJ2	Uncharacterized protein.	Uncharacterized protein.	0.424
V7C9F3_PHAVU	V7CEQ1_PHAVU	V7C9F3	V7CEQ1	Uncharacterized protein.	Uncharacterized protein.	0.491
V7C9F3_PHAVU	V7CRY8_PHAVU	V7C9F3	V7CRY8	Uncharacterized protein.	Uncharacterized protein.	0.425
V7CBN7_PHAVU	V7C9F3_PHAVU	V7CBN7	V7C9F3	Uncharacterized protein.	Uncharacterized protein.	0.901
V7CBN7_PHAVU	V7CEJ2_PHAVU	V7CBN7	V7CEJ2	Uncharacterized protein.	Uncharacterized protein.	0.447
V7CBN7_PHAVU	V7CEQ1_PHAVU	V7CBN7	V7CEQ1	Uncharacterized protein.	Uncharacterized protein.	0.511
V7CBN7_PHAVU	V7CRY8_PHAVU	V7CBN7	V7CRY8	Uncharacterized protein.	Uncharacterized protein.	0.442
V7CEJ2_PHAVU	V7B0F7_PHAVU	V7CEJ2	V7B0F7	Uncharacterized protein.	Uncharacterized protein.	0.484
V7CEJ2_PHAVU	V7C9F3_PHAVU	V7CEJ2	V7C9F3	Uncharacterized protein.	Uncharacterized protein.	0.424
V7CEJ2_PHAVU	V7CBN7_PHAVU	V7CEJ2	V7CBN7	Uncharacterized protein.	Uncharacterized protein.	0.447
V7CEQ1_PHAVU	V7B0F7_PHAVU	V7CEQ1	V7B0F7	Uncharacterized protein.	Uncharacterized protein.	0.515
V7CEQ1_PHAVU	V7C9F3_PHAVU	V7CEQ1	V7C9F3	Uncharacterized protein.	Uncharacterized protein.	0.491
V7CEQ1_PHAVU	V7CBN7_PHAVU	V7CEQ1	V7CBN7	Uncharacterized protein.	Uncharacterized protein.	0.511
V7CM32_PHAVU	V7BUQ9_PHAVU	V7CM32	V7BUQ9	Flavokinase domain-containing protein.	Uncharacterized protein.	0.918
V7CRR7_PHAVU	V7B0F7_PHAVU	V7CRR7	V7B0F7	Uncharacterized protein.	Uncharacterized protein.	0.400