18 items (Phaseolus vulgaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V7B6N3_PHAVU	Uncharacterized protein. (302 aa)
	V7B1V8_PHAVU	Uncharacterized protein. (253 aa)
	V7B1G5_PHAVU	Uncharacterized protein. (252 aa)
	V7ALA6_PHAVU	Uncharacterized protein. (303 aa)
	V7B0F7_PHAVU	Uncharacterized protein. (341 aa)
	V7CZQ1_PHAVU	Uncharacterized protein. (359 aa)
	V7CYS6_PHAVU	Uncharacterized protein. (280 aa)
	V7CYS0_PHAVU	Uncharacterized protein. (399 aa)
	V7CVB6_PHAVU	Uncharacterized protein. (269 aa)
	V7CRY8_PHAVU	Uncharacterized protein. (312 aa)
	V7CLU2_PHAVU	Uncharacterized protein. (177 aa)
	V7CHM8_PHAVU	Uncharacterized protein. (258 aa)
	V7CEQ1_PHAVU	Uncharacterized protein. (243 aa)
	V7CBN7_PHAVU	Uncharacterized protein. (241 aa)
	V7C9F3_PHAVU	Uncharacterized protein. (242 aa)
	V7BUQ9_PHAVU	Uncharacterized protein. (365 aa)
	V7BNM4_PHAVU	Phosphoglycolate phosphatase. (297 aa)
	V7B6T6_PHAVU	Uncharacterized protein. (136 aa)

Your Current Organism:

Phaseolus vulgaris

NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V7ALA6_PHAVU	V7BUQ9_PHAVU	V7ALA6	V7BUQ9	Uncharacterized protein.	Uncharacterized protein.	0.508
V7B0F7_PHAVU	V7CEQ1_PHAVU	V7B0F7	V7CEQ1	Uncharacterized protein.	Uncharacterized protein.	0.515
V7B1G5_PHAVU	V7BUQ9_PHAVU	V7B1G5	V7BUQ9	Uncharacterized protein.	Uncharacterized protein.	0.948
V7B1V8_PHAVU	V7BUQ9_PHAVU	V7B1V8	V7BUQ9	Uncharacterized protein.	Uncharacterized protein.	0.510
V7B6N3_PHAVU	V7BUQ9_PHAVU	V7B6N3	V7BUQ9	Uncharacterized protein.	Uncharacterized protein.	0.508
V7B6T6_PHAVU	V7BUQ9_PHAVU	V7B6T6	V7BUQ9	Uncharacterized protein.	Uncharacterized protein.	0.510
V7BUQ9_PHAVU	V7ALA6_PHAVU	V7BUQ9	V7ALA6	Uncharacterized protein.	Uncharacterized protein.	0.508
V7BUQ9_PHAVU	V7B1G5_PHAVU	V7BUQ9	V7B1G5	Uncharacterized protein.	Uncharacterized protein.	0.948
V7BUQ9_PHAVU	V7B1V8_PHAVU	V7BUQ9	V7B1V8	Uncharacterized protein.	Uncharacterized protein.	0.510
V7BUQ9_PHAVU	V7B6N3_PHAVU	V7BUQ9	V7B6N3	Uncharacterized protein.	Uncharacterized protein.	0.508
V7BUQ9_PHAVU	V7B6T6_PHAVU	V7BUQ9	V7B6T6	Uncharacterized protein.	Uncharacterized protein.	0.510
V7BUQ9_PHAVU	V7CHM8_PHAVU	V7BUQ9	V7CHM8	Uncharacterized protein.	Uncharacterized protein.	0.510
V7BUQ9_PHAVU	V7CVB6_PHAVU	V7BUQ9	V7CVB6	Uncharacterized protein.	Uncharacterized protein.	0.510
V7BUQ9_PHAVU	V7CYS6_PHAVU	V7BUQ9	V7CYS6	Uncharacterized protein.	Uncharacterized protein.	0.508
V7C9F3_PHAVU	V7CBN7_PHAVU	V7C9F3	V7CBN7	Uncharacterized protein.	Uncharacterized protein.	0.901
V7C9F3_PHAVU	V7CEQ1_PHAVU	V7C9F3	V7CEQ1	Uncharacterized protein.	Uncharacterized protein.	0.491
V7C9F3_PHAVU	V7CRY8_PHAVU	V7C9F3	V7CRY8	Uncharacterized protein.	Uncharacterized protein.	0.425
V7CBN7_PHAVU	V7C9F3_PHAVU	V7CBN7	V7C9F3	Uncharacterized protein.	Uncharacterized protein.	0.901
V7CBN7_PHAVU	V7CEQ1_PHAVU	V7CBN7	V7CEQ1	Uncharacterized protein.	Uncharacterized protein.	0.511
V7CBN7_PHAVU	V7CRY8_PHAVU	V7CBN7	V7CRY8	Uncharacterized protein.	Uncharacterized protein.	0.442