STRINGSTRING
gor gor SSA_0574 SSA_0574 pdhD pdhD acoL acoL SSA_1865 SSA_1865
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gorGlutathione reductase, putative; GC: 45.01%; Codon Adaptation Index (CAI): 0.79; Protein involved in FAD binding. (513 aa)
SSA_0574YdjX protein, putative; GC: 46.41%; Transporter classification TC:9.B.27.1.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.765. Conserved, possibly membrane-associated. Curator(s): D. Akan, J. Alves. (208 aa)
pdhDDihydrolipoamide dehydrogenase, putative; GC: 44.07%; Codon Adaptation Index (CAI): 0.774; Protein involved in FAD binding. (446 aa)
acoLDihydrolipoamide dehydrogenase, putative; GC: 45.81%; Codon Adaptation Index (CAI): 0.808; Protein involved in FAD binding. (568 aa)
SSA_1865Thioredoxin reductase, putative; GC: 48.63%; Codon Adaptation Index (CAI): 0.781; Protein involved in removal of superoxide radicals. (304 aa)
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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