STRINGSTRING
PNK_0723 PNK_0723 PNK_0995 PNK_0995 PNK_1230 PNK_1230 PNK_1409 PNK_1409 PNK_2229 PNK_2229 PNK_2242 PNK_2242
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PNK_0723Conserved putative membrane protein. (370 aa)
PNK_0995Hypothetical protein. (300 aa)
PNK_1230Conserved putative membrane protein. (250 aa)
PNK_1409Putative glycosyl transferase family 2 protein. (248 aa)
PNK_2229Conserved hypothetical protein. (427 aa)
PNK_2242Hypothetical protein. (366 aa)
Your Current Organism:
Protochlamydia naegleriophila
NCBI taxonomy Id: 389348
Other names: C. Protochlamydia naegleriophila, Candidatus Protochlamydia naegleriophila, strain KNic
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