STRINGSTRING
Smal_0019 Smal_0019 Smal_0302 Smal_0302 Smal_0446 Smal_0446 Smal_0525 Smal_0525 Smal_2263 Smal_2263 Smal_3411 Smal_3411
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smal_0019KEGG: xac:XAC0018 hypothetical protein. (235 aa)
Smal_0302KEGG: xcb:XC_0023 hypothetical protein. (220 aa)
Smal_0446KEGG: xac:XAC3686 hypothetical protein. (187 aa)
Smal_0525PFAM: protein of unknown function DUF1212; KEGG: xcb:XC_3598 hypothetical protein. (419 aa)
Smal_2263KEGG: mxa:MXAN_5214 hypothetical protein. (306 aa)
Smal_3411PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcv:XCV3685 TonB-dependent outer membrane receptor. (953 aa)
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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