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| | Smal_0062 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: reu:Reut_B4471 PAS/PAC sensor hybrid histidine kinase. (807 aa) |
| | Smal_0110 | PFAM: nitrogen regulatory protein P-II; KEGG: xac:XAC0205 nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (112 aa) |
| | Smal_0111 | TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: xcb:XC_0196 ammonium transporter. (476 aa) |
| | Smal_0122 | Signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xcb:XC_0197 two-component system sensor protein. (353 aa) |
| | ntrC | Nitrogen metabolism transcriptional regulator, NtrC, Fis Family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (482 aa) |
| | Smal_0156 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN3768 two-component sensor/response regulator protein. (1199 aa) |
| | Smal_0190 | Cyclic nucleotide-binding protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; cyclic nucleotide-binding; KEGG: xcv:XCV0266 putative cyclic nucleotide-binding protein. (346 aa) |
| | Smal_0191 | PFAM: Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: xcb:XC_0250 hypothetical protein. (834 aa) |
| | Smal_0228 | KEGG: xom:XOO_0384 hypothetical protein. (124 aa) |
| | Smal_0229 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xom:XOO_0385 two-component system regulatory protein. (227 aa) |
| | Smal_0230 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: xac:XAC4022 two-component system sensor protein. (475 aa) |
| | glnE | (Glutamate--ammonia-ligase) adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal tra [...] (931 aa) |
| | Smal_0404 | PFAM: EAL domain protein; KEGG: swi:Swit_2925 EAL domain protein. (538 aa) |
| | Smal_0429 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: mms:mma_2307 sensory box/GGDEF family protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (1020 aa) |
| | Smal_0438 | PFAM: OmpA/MotB domain protein; KEGG: xom:XOO_0624 flagellar motor protein MotB. (318 aa) |
| | Smal_0439 | KEGG: xom:XOO_0625 flagellar motor protein MotA. (284 aa) |
| | Smal_0447 | KEGG: xcv:XCV3804 two-component system sensor histidine kinase-response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (662 aa) |
| | Smal_0470 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bpt:Bpet2466 two-component response regulator. (239 aa) |
| | Smal_0471 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bac:BamMC406_5549 integral membrane sensor signal transduction histidine kinase. (489 aa) |
| | Smal_0472 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cvi:CV_0760 probable two-component sensor protein. (448 aa) |
| | Smal_0473 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cvi:CV_0761 probable two-component response regulator. (229 aa) |
| | Smal_0652 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xom:XOO_3552 two-component system regulatory protein. (237 aa) |
| | Smal_0653 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xcb:XC_3451 two-component system sensor protein. (423 aa) |
| | Smal_0737 | PFAM: EAL domain protein; response regulator receiver; KEGG: pfo:PflO1_3039 putative diguanylate phosphodiesterase (EAL domain) with response regulator receiver modulation. (406 aa) |
| | Smal_0738 | Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pap:PSPA7_3015 kinase sensor protein. (925 aa) |
| | Smal_0823 | PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xcb:XC_3273 two-component system sensor protein. (443 aa) |
| | Smal_0824 | Two component transcriptional regulator, winged helix family; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xcb:XC_3272 two-component system regulatory protein. (229 aa) |
| | Smal_0879 | PFAM: type IV pilus assembly PilZ; KEGG: xcb:XC_3221 type IV fimbriae assembly protein. (117 aa) |
| | Smal_0918 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_2572 sensor histidine kinase. (461 aa) |
| | Smal_0919 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psb:Psyr_3127 response regulator receiver:transcriptional regulatory protein, C-terminal. (227 aa) |
| | Smal_0954 | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (474 aa) |
| | Smal_1031 | KEGG: xcv:XCV1708 histidine kinase-response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein. (689 aa) |
| | Smal_1051 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ent:Ent638_2010 diguanylate cyclase. (350 aa) |
| | Smal_1056 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: reh:H16_B1591 putative GGDEF family protein. (580 aa) |
| | Smal_1144 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: pap:PSPA7_3579 hypothetical protein. (686 aa) |
| | Smal_1169 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: xcb:XC_2304 chemotaxis protein. (740 aa) |
| | Smal_1189 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: mca:MCA1765 sensor histidine kinase. (459 aa) |
| | Smal_1190 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: reu:Reut_A0526 two component transcriptional regulator, winged helix family. (227 aa) |
| | Smal_1194 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: psa:PST_0006 GGDEF domain protein. (471 aa) |
| | Smal_1200 | PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mfa:Mfla_1725 metal dependent phosphohydrolase. (203 aa) |
| | Smal_1226 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: xcv:XCV2973 putative signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (807 aa) |
| | Smal_1227 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mms:mma_1623 diguanylate cyclase. (554 aa) |
| | Smal_1229 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: xcv:XCV2971 putative sensor protein. (356 aa) |
| | Smal_1264 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Metal-dependent hydrolase HDOD; KEGG: xac:XAC1420 hypothetical protein. (512 aa) |
| | glnD | UTP-GlnB uridylyltransferase, GlnD; KEGG: xcv:XCV1486 PII uridylyl-transferase; TIGRFAM: protein-P-II uridylyltransferase; PFAM: amino acid-binding ACT domain protein; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; GlnD PII-uridylyltransferase; SMART: metal-dependent phosphohydrolase HD region. (875 aa) |
| | Smal_1299 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: azo:azo2745 probable DNA-binding response regulator. (242 aa) |
| | Smal_1300 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mes:Meso_2910 periplasmic sensor signal transduction histidine kinase. (469 aa) |
| | Smal_1301 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Two component regulator propeller; Two component regulator three Y domain protein; KEGG: xcv:XCV1610 putative sensor protein. (1008 aa) |
| | Smal_1334 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: xcv:XCV2660 two-component system response regulator. (447 aa) |
| | Smal_1393 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bja:blr4802 two-component response regulator. (223 aa) |
| | Smal_1394 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bja:blr4803 two-component hybrid sensor and regulator. (447 aa) |
| | Smal_1547 | KEGG: xcv:XCV2735 hypothetical protein. (99 aa) |
| | Smal_1611 | Diguanylate cyclase/phosphodiesterase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: cps:CPS_4411 GAF domain/GGDEF domain/EAL domain protein. (946 aa) |
| | Smal_1620 | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: xoo:XOO2725 hypothetical protein. (689 aa) |
| | Smal_1710 | Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: atc:AGR_C_2062 hypothetical protein. (648 aa) |
| | Smal_1735 | PFAM: response regulator receiver; KEGG: xac:XAC1284 two-component system regulatory protein. (119 aa) |
| | Smal_1736 | PAS/PAC sensor signal transduction histidine kinase; KEGG: xac:XAC1282 two-component system sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein. (387 aa) |
| | Smal_1737 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xcb:XC_3057 two-component system sensor protein. (1037 aa) |
| | Smal_1738 | PFAM: MCP methyltransferase CheR-type; KEGG: xcb:XC_3058 chemotaxis protein. (274 aa) |
| | Smal_1739 | PFAM: CheB methylesterase; KEGG: xac:XAC1280 protein-glutamate methylesterase. (191 aa) |
| | Smal_1740 | PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xcb:XC_3060 two-component system regulatory protein. (377 aa) |
| | Smal_1741 | PFAM: BLUF domain protein; KEGG: xac:XAC2120 hypothetical protein. (142 aa) |
| | Smal_1791 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_2525 integral membrane sensor signal transduction histidine kinase. (358 aa) |
| | Smal_1792 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmu:Bmul_4353 two component transcriptional regulator, winged helix family. (249 aa) |
| | Smal_1828 | PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: xac:XAC1877 response regulator. (379 aa) |
| | Smal_1829 | Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: xcv:XCV1919 sensory/regulatory protein RpfC. (907 aa) |
| | Smal_1830 | PFAM: Enoyl-CoA hydratase/isomerase; KEGG: xcb:XC_2332 enoyl-CoA hydratase. (289 aa) |
| | cheB | Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (357 aa) |
| | cheD | CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (198 aa) |
| | Smal_1845 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (289 aa) |
| | Smal_1846 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: xcv:XCV1952 methyl-accepting chemotaxis protein. (755 aa) |
| | Smal_1847 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: xcv:XCV1933 methyl-accepting chemotaxis protein. (793 aa) |
| | Smal_1849 | PFAM: CheW domain protein; KEGG: xcb:XC_2318 chemotaxis protein. (163 aa) |
| | ycgR | YcgR family protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility. (257 aa) |
| | Smal_1851 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: xcb:XC_2309 chemotaxis protein. (745 aa) |
| | Smal_1852 | CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: xcb:XC_2303 chemotaxis protein. (664 aa) |
| | Smal_1853 | PFAM: response regulator receiver; KEGG: xom:XOO_2692 chemotaxis response regulator. (121 aa) |
| | Smal_1855 | PFAM: CheW domain protein; KEGG: xcv:XCV1959 chemotaxis signal transduction protein. (429 aa) |
| | Smal_1857 | PFAM: OmpA/MotB domain protein; KEGG: xom:XOO_2688 flagellar motor protein MotD. (338 aa) |
| | Smal_1858 | PFAM: MotA/TolQ/ExbB proton channel; KEGG: xcv:XCV1962 flagellar motor protein. (246 aa) |
| | Smal_1859 | CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: xom:XOO_2483 chemotaxis related protein. (614 aa) |
| | Smal_1860 | Putative chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (201 aa) |
| | Smal_1861 | PFAM: response regulator receiver; KEGG: xom:XOO_2481 chemotaxis protein. (126 aa) |
| | fliA | RNA polymerase, sigma 28 subunit, FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (247 aa) |
| | Smal_1863 | PFAM: Cobyrinic acid ac-diamide synthase; KEGG: xcb:XC_2280 flagellar biosynthesis switch protein. (295 aa) |
| | Smal_1864 | PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: xcv:XCV1979 flagellar biosynthesis regulator FlhF. (542 aa) |
| | flhA | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (702 aa) |
| | flhB | Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (376 aa) |
| | Smal_1867 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: pau:PA14_42220 putative integral membrane sensor domain. (710 aa) |
| | Smal_1868 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (263 aa) |
| | Smal_1869 | PFAM: export protein FliQ family 3; KEGG: xom:XOO_2471 flagellar biosynthesis. (89 aa) |
| | fliP | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (259 aa) |
| | Smal_1871 | PFAM: flagellar biosynthesis protein FliO; KEGG: xcb:XC_2269 flagellar protein. (139 aa) |
| | Smal_1872 | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (111 aa) |
| | Smal_1873 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (334 aa) |
| | Smal_1874 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (171 aa) |
| | Smal_1875 | PFAM: flagellar hook-length control protein; KEGG: xcb:XC_2265 flagellar protein. (389 aa) |
| | Smal_1876 | TIGRFAM: flagellar export protein FliJ; KEGG: xcb:XC_2264 flagellar FliJ protein. (155 aa) |
| | Smal_1877 | ATPase, FliI/YscN family; KEGG: xcb:XC_2263 flagellar protein; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase. (461 aa) |
| | Smal_1878 | PFAM: flagellar assembly protein FliH; KEGG: xac:XAC1952 flagellar protein. (213 aa) |
| | Smal_1879 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (333 aa) |
| | Smal_1880 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (548 aa) |
| | fliE | TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: xoo:XOO2600 flagellar protein. (121 aa) |
| | Smal_1883 | Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; flagellar regulatory FleQ domain protein; SMART: AAA ATPase; KEGG: xom:XOO_2447 transcriptional regulator. (501 aa) |
| | Smal_1884 | PFAM: response regulator receiver; KEGG: xac:XAC1968 response regulator. (125 aa) |
| | Smal_1885 | RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (469 aa) |
| | Smal_1891 | PFAM: flagellar protein FliS; KEGG: xcv:XCV2020 flagellin-specific chaperone FliS. (138 aa) |
| | Smal_1892 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (472 aa) |
| | Smal_1893 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (392 aa) |
| | Smal_1894 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (395 aa) |
| | Smal_1895 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (405 aa) |
| | Smal_1896 | TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: xcb:XC_2244 flagellar hook-associated protein FlgL. (400 aa) |
| | Smal_1897 | TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: xcb:XC_2243 flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. (626 aa) |
| | Smal_1898 | KEGG: xom:XOO_2436 peptidoglycan hydrolase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2. (399 aa) |
| | flgI | Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (376 aa) |
| | flgH | Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (230 aa) |
| | Smal_1901 | TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: xac:XAC1981 flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family. (261 aa) |
| | Smal_1902 | TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: xac:XAC1982 flagellar basal body rod protein FlgF. (249 aa) |
| | Smal_1903 | PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: xac:XAC1983 flagellar hook protein FlgE. (407 aa) |
| | Smal_1904 | Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. (227 aa) |
| | Smal_1905 | TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: xom:XOO_2429 flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (135 aa) |
| | Smal_1906 | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (131 aa) |
| | Smal_1907 | PFAM: response regulator receiver; CheW domain protein; KEGG: xcb:XC_2233 chemotaxis protein. (314 aa) |
| | Smal_1908 | Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (218 aa) |
| | Smal_1909 | Putative anti-sigma-28 factor, FlgM; KEGG: xcb:XC_2231 flagellar protein. (101 aa) |
| | Smal_1910 | KEGG: xac:XAC1990 hypothetical protein. (112 aa) |
| | Smal_1911 | Histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: xom:XOO_2423 histidine kinase. (406 aa) |
| | Smal_1912 | Cyclic nucleotide-binding protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: xom:XOO_2422 C-di-GMP phosphodiesterase A. (590 aa) |
| | Smal_1914 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: xcv:XCV2041 putative signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein. (919 aa) |
| | Smal_1917 | PFAM: chemotaxis sensory transducer; KEGG: xac:XAC1996 chemotaxis protein. (396 aa) |
| | Smal_1948 | Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cvi:CV_2400 sensor protein EvgS precursor. (727 aa) |
| | Smal_2087 | Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ppw:PputW619_2769 sigma54 specific transcriptional regulator, fis family. (451 aa) |
| | Smal_2105 | Putative sigma54 specific transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; sigma-54 factor interaction domain-containing protein; KEGG: xac:XAC3026 transcriptional regulator. (497 aa) |
| | Smal_2114 | Diguanylate cyclase with PAS/PAC sensor; KEGG: xcc:XCC4224 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein. (569 aa) |
| | Smal_2118 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bcm:Bcenmc03_4368 two component transcriptional regulator, winged helix family. (238 aa) |
| | Smal_2119 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bur:Bcep18194_C6826 periplasmic sensor signal transduction histidine kinase. (358 aa) |
| | Smal_2172 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: azo:azo0975 probable two-component response regulatory protein. (224 aa) |
| | Smal_2173 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: mca:MCA1765 sensor histidine kinase. (457 aa) |
| | Smal_2224 | Putative PAS/PAC sensor protein; KEGG: wsu:WS1556 diguanylate cyclase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein. (142 aa) |
| | Smal_2404 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tbd:Tbd_2634 diguanylate cyclase with PAS/PAC sensor. (479 aa) |
| | Smal_2405 | KEGG: bra:BRADO1824 putative methyl-accepting chemotaxis protein (MCP) with multiple PAS domains; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (608 aa) |
| | Smal_2409 | Diguanylate cyclase with PAS/PAC sensor; KEGG: xcv:XCV0667 putative sensor protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (729 aa) |
| | Smal_2952 | Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: xcv:XCV0072 putative secreted protein. (358 aa) |
| | Smal_2991 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: xcv:XCV1254 two-component system sensor protein. (429 aa) |
| | Smal_2992 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xac:XAC1221 two-component system regulatory protein. (237 aa) |
| | Smal_3007 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: xom:XOO_2704 chemotaxis protein. (707 aa) |
| | Smal_3018 | PFAM: response regulator receiver; KEGG: xcb:XC_3197 regulatory protein-PilH family. (123 aa) |
| | Smal_3042 | Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two component regulator propeller; Two component regulator three Y domain protein; KEGG: xcv:XCV3167 two-component system sensor histidine kinase-response regulator hybrid protein. (1181 aa) |
| | Smal_3083 | PFAM: CheW domain protein; KEGG: xac:XAC3096 hypothetical protein. (154 aa) |
| | Smal_3084 | KEGG: xcv:XCV3228 hypothetical protein. (444 aa) |
| | Smal_3085 | CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: xcc:XCC2921 PilL protein. (2212 aa) |
| | Smal_3086 | PFAM: chemotaxis sensory transducer; KEGG: xcb:XC_1186 pilus biogenesis protein. (678 aa) |
| | Smal_3087 | PFAM: CheW domain protein; KEGG: xcb:XC_1185 pilus biogenesis protein. (176 aa) |
| | Smal_3088 | PFAM: response regulator receiver; KEGG: xcb:XC_1184 PilH protein. (120 aa) |
| | Smal_3089 | PFAM: response regulator receiver; KEGG: xcb:XC_1183 pilus protein. (133 aa) |
| | Smal_3142 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pap:PSPA7_3498 probable two-component response regulator. (245 aa) |
| | Smal_3143 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pau:PA14_41270 putative two-component sensor. (429 aa) |
| | Smal_3165 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xac:XAC3237 two-component system sensor protein. (592 aa) |
| | Smal_3166 | Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: xcb:XC_1061 two-component system regulatory protein. (457 aa) |
| | Smal_3319 | Putative signal transduction protein; PFAM: response regulator receiver; Metal-dependent hydrolase HDOD; KEGG: xac:XAC3443 response regulator. (373 aa) |
| | Smal_3355 | PAS/PAC sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: xoo:XOO1115 sensor histidine kinase. (880 aa) |
| | Smal_3356 | Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: xcb:XC_0816 transcriptional regulator LuxR/UhpA family. (216 aa) |
| | Smal_3357 | PFAM: extracellular solute-binding protein family 1; KEGG: xcv:XCV3609 putative periplasmic iron-binding protein. (351 aa) |
| | Smal_3358 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: xcv:XCV3610 two-component system sensor protein. (463 aa) |
| | Smal_3359 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xcv:XCV3611 two-component system regulatory protein. (231 aa) |
| | Smal_3360 | PFAM: phosphate-selective porin O and P; KEGG: xac:XAC3484 porin O. (391 aa) |
| | Smal_3361 | TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: xcv:XCV3613 citrate:H+ symporter. (443 aa) |
| | Smal_3384 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mag:amb3602 FOG: GGDEF domain. (481 aa) |
| | Smal_3433 | PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xcb:XC_0730 histidine kinase/response regulator hybrid protein. (503 aa) |
| | Smal_3434 | PFAM: response regulator receiver; KEGG: xcb:XC_0729 two-component system regulatory protein. (146 aa) |
| | Smal_3435 | Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; PAS fold-4 domain protein; KEGG: xcv:XCV0744 two-component system sensor protein. (605 aa) |
| | Smal_3537 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: xac:XAC1899 chemotaxis protein. (843 aa) |
| | Smal_3619 | Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ccr:CC_1181 sensor histidine kinase. (432 aa) |
| | Smal_3620 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ccr:CC_1182 DNA-binding response regulator. (235 aa) |
| | Smal_3633 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: xcb:XC_2320 chemotaxis protein. (845 aa) |
| | Smal_3677 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ppg:PputGB1_2050 diguanylate cyclase. (524 aa) |
| | Smal_3705 | PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: xom:XOO_0483 two-component system regulatory protein. (628 aa) |
| | Smal_3706 | Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: xcb:XC_0495 two-component system sensor protein. (738 aa) |
| | Smal_3754 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: xcb:XC_0420 hypothetical protein. (512 aa) |
| | Smal_3772 | PFAM: nitrogen regulatory protein P-II; KEGG: xcb:XC_3957 nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (112 aa) |
| | Smal_3875 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ajs:Ajs_4122 diguanylate cyclase. (400 aa) |
| | Smal_3896 | PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: xcb:XC_0286 chemotaxis protein. (706 aa) |
| | Smal_3978 | Multi-sensor hybrid histidine kinase; KEGG: xom:XOO_0308 two-component system sensor protein; TIGRFAM: PAS sensor protein; PFAM: Na+/solute symporter; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein. (1152 aa) |
| | Smal_3993 | PFAM: chemotaxis sensory transducer; PAS fold domain protein; KEGG: xac:XAC1897 chemotaxis protein. (701 aa) |
| | Smal_4000 | TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pmy:Pmen_4080 diguanylate cyclase. (426 aa) |
