STRINGSTRING
Smal_0062 Smal_0062 Smal_0156 Smal_0156 Smal_0447 Smal_0447 Smal_0737 Smal_0737 Smal_0738 Smal_0738 Smal_1031 Smal_1031 Smal_1226 Smal_1226 Smal_1227 Smal_1227 Smal_1229 Smal_1229 Smal_1334 Smal_1334 Smal_1735 Smal_1735 Smal_1736 Smal_1736 Smal_1737 Smal_1737 Smal_1740 Smal_1740 Smal_1912 Smal_1912 Smal_1914 Smal_1914 Smal_1948 Smal_1948 Smal_2114 Smal_2114 Smal_2409 Smal_2409 Smal_3042 Smal_3042 Smal_3433 Smal_3433 Smal_3434 Smal_3434 Smal_3435 Smal_3435 Smal_3705 Smal_3705 Smal_3706 Smal_3706 Smal_3978 Smal_3978
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smal_0062Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: reu:Reut_B4471 PAS/PAC sensor hybrid histidine kinase. (807 aa)
Smal_0156Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; SMART: extracellular solute-binding protein family 3; KEGG: pen:PSEEN3768 two-component sensor/response regulator protein. (1199 aa)
Smal_0447KEGG: xcv:XCV3804 two-component system sensor histidine kinase-response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (662 aa)
Smal_0737PFAM: EAL domain protein; response regulator receiver; KEGG: pfo:PflO1_3039 putative diguanylate phosphodiesterase (EAL domain) with response regulator receiver modulation. (406 aa)
Smal_0738Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pap:PSPA7_3015 kinase sensor protein. (925 aa)
Smal_1031KEGG: xcv:XCV1708 histidine kinase-response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein. (689 aa)
Smal_1226Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: xcv:XCV2973 putative signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (807 aa)
Smal_1227TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mms:mma_1623 diguanylate cyclase. (554 aa)
Smal_1229TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: xcv:XCV2971 putative sensor protein. (356 aa)
Smal_1334TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: xcv:XCV2660 two-component system response regulator. (447 aa)
Smal_1735PFAM: response regulator receiver; KEGG: xac:XAC1284 two-component system regulatory protein. (119 aa)
Smal_1736PAS/PAC sensor signal transduction histidine kinase; KEGG: xac:XAC1282 two-component system sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein. (387 aa)
Smal_1737Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xcb:XC_3057 two-component system sensor protein. (1037 aa)
Smal_1740PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xcb:XC_3060 two-component system regulatory protein. (377 aa)
Smal_1912Cyclic nucleotide-binding protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: xom:XOO_2422 C-di-GMP phosphodiesterase A. (590 aa)
Smal_1914Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: xcv:XCV2041 putative signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein. (919 aa)
Smal_1948Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cvi:CV_2400 sensor protein EvgS precursor. (727 aa)
Smal_2114Diguanylate cyclase with PAS/PAC sensor; KEGG: xcc:XCC4224 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein. (569 aa)
Smal_2409Diguanylate cyclase with PAS/PAC sensor; KEGG: xcv:XCV0667 putative sensor protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (729 aa)
Smal_3042Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two component regulator propeller; Two component regulator three Y domain protein; KEGG: xcv:XCV3167 two-component system sensor histidine kinase-response regulator hybrid protein. (1181 aa)
Smal_3433PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xcb:XC_0730 histidine kinase/response regulator hybrid protein. (503 aa)
Smal_3434PFAM: response regulator receiver; KEGG: xcb:XC_0729 two-component system regulatory protein. (146 aa)
Smal_3435Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; PAS fold-4 domain protein; KEGG: xcv:XCV0744 two-component system sensor protein. (605 aa)
Smal_3705PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: xom:XOO_0483 two-component system regulatory protein. (628 aa)
Smal_3706Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: xcb:XC_0495 two-component system sensor protein. (738 aa)
Smal_3978Multi-sensor hybrid histidine kinase; KEGG: xom:XOO_0308 two-component system sensor protein; TIGRFAM: PAS sensor protein; PFAM: Na+/solute symporter; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein. (1152 aa)
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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