(5 nodes) Mixed, incl. Regulation of translational initiation, and RNA polymerase sigma-70 region 4 network (Stenotrophomonas maltophilia R5513)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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Your Input:
	Smal_1606	KEGG: xcb:XC_2759 hypothetical protein. (64 aa)
	Smal_1607	KEGG: xcb:XC_2754 ABC transporter ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase. (590 aa)
	Smal_1608	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: xcv:XCV1574 hypothetical protein. (201 aa)
	Smal_1609	KEGG: azo:azo0076 hypothetical protein. (328 aa)
	Smal_1610	RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bbr:BB3268 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (207 aa)

Your Current Organism:

Stenotrophomonas maltophilia R5513

NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Smal_1606	Smal_1607	KEGG: xcb:XC_2759 hypothetical protein.	KEGG: xcb:XC_2754 ABC transporter ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.	0.572
Smal_1606	Smal_1608	KEGG: xcb:XC_2759 hypothetical protein.	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: xcv:XCV1574 hypothetical protein.	0.572
Smal_1606	Smal_1609	KEGG: xcb:XC_2759 hypothetical protein.	KEGG: azo:azo0076 hypothetical protein.	0.504
Smal_1606	Smal_1610	KEGG: xcb:XC_2759 hypothetical protein.	RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bbr:BB3268 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.504
Smal_1607	Smal_1606	KEGG: xcb:XC_2754 ABC transporter ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.	KEGG: xcb:XC_2759 hypothetical protein.	0.572
Smal_1607	Smal_1608	KEGG: xcb:XC_2754 ABC transporter ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: xcv:XCV1574 hypothetical protein.	0.833
Smal_1607	Smal_1609	KEGG: xcb:XC_2754 ABC transporter ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.	KEGG: azo:azo0076 hypothetical protein.	0.731
Smal_1607	Smal_1610	KEGG: xcb:XC_2754 ABC transporter ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.	RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bbr:BB3268 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.740
Smal_1608	Smal_1606	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: xcv:XCV1574 hypothetical protein.	KEGG: xcb:XC_2759 hypothetical protein.	0.572
Smal_1608	Smal_1607	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: xcv:XCV1574 hypothetical protein.	KEGG: xcb:XC_2754 ABC transporter ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.	0.833
Smal_1608	Smal_1609	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: xcv:XCV1574 hypothetical protein.	KEGG: azo:azo0076 hypothetical protein.	0.730
Smal_1608	Smal_1610	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: xcv:XCV1574 hypothetical protein.	RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bbr:BB3268 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.730
Smal_1609	Smal_1606	KEGG: azo:azo0076 hypothetical protein.	KEGG: xcb:XC_2759 hypothetical protein.	0.504
Smal_1609	Smal_1607	KEGG: azo:azo0076 hypothetical protein.	KEGG: xcb:XC_2754 ABC transporter ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.	0.731
Smal_1609	Smal_1608	KEGG: azo:azo0076 hypothetical protein.	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: xcv:XCV1574 hypothetical protein.	0.730
Smal_1609	Smal_1610	KEGG: azo:azo0076 hypothetical protein.	RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bbr:BB3268 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.849
Smal_1610	Smal_1606	RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bbr:BB3268 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	KEGG: xcb:XC_2759 hypothetical protein.	0.504
Smal_1610	Smal_1607	RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bbr:BB3268 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	KEGG: xcb:XC_2754 ABC transporter ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.	0.740
Smal_1610	Smal_1608	RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bbr:BB3268 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: xcv:XCV1574 hypothetical protein.	0.730
Smal_1610	Smal_1609	RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bbr:BB3268 RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	KEGG: azo:azo0076 hypothetical protein.	0.849

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