STRINGSTRING
Smal_0037 Smal_0037 Smal_0245 Smal_0245 Smal_0250 Smal_0250 Smal_0301 Smal_0301 Smal_0419 Smal_0419 Smal_0819 Smal_0819 Smal_0820 Smal_0820 Smal_1087 Smal_1087 Smal_1214 Smal_1214 Smal_1376 Smal_1376 Smal_1492 Smal_1492 Smal_1693 Smal_1693 Smal_2047 Smal_2047 Smal_2057 Smal_2057 Smal_2110 Smal_2110 Smal_2461 Smal_2461 Smal_2636 Smal_2636 Smal_2764 Smal_2764 Smal_2871 Smal_2871 Smal_2872 Smal_2872 Smal_2873 Smal_2873 Smal_3061 Smal_3061 Smal_3134 Smal_3134 Smal_3139 Smal_3139 Smal_3197 Smal_3197 Smal_3556 Smal_3556 Smal_3865 Smal_3865 Smal_3959 Smal_3959
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smal_0037PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC1143 TonB-dependent receptor. (757 aa)
Smal_0245PFAM: peptidase M28; KEGG: xcv:XCV4096 putative peptidase precursor. (550 aa)
Smal_0250PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcv:XCV3187 TonB-dependent outer membrane receptor. (952 aa)
Smal_0301PFAM: peptidase M28; KEGG: xcb:XC_0024 hypothetical protein. (571 aa)
Smal_0419PFAM: peptidase M28; KEGG: xac:XAC0615 aminopeptidase. (549 aa)
Smal_0819PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcv:XCV3187 TonB-dependent outer membrane receptor. (974 aa)
Smal_0820PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcv:XCV3187 TonB-dependent outer membrane receptor. (975 aa)
Smal_1087PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: xac:XAC1200 prolyl oligopeptidase family protein. (650 aa)
Smal_1214PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcb:XC_1459 outer membrane hemin receptor. (734 aa)
Smal_1376KEGG: xcv:XCV2823 TonB-dependent outer membrane receptor. (1081 aa)
Smal_1492PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1341 TonB-dependent outer membrane receptor. (977 aa)
Smal_1693PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_C0393 putative TonB-dependent siderophore receptor. (858 aa)
Smal_2047PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sal:Sala_2600 TonB-dependent receptor. (803 aa)
Smal_2057PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ilo:IL2154 outer membrane protein. (728 aa)
Smal_2110PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_2950 TonB-dependent receptor, plug. (765 aa)
Smal_2461TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcb:XC_2846 iron receptor. (713 aa)
Smal_2636PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC4368 TonB-dependent receptor. (747 aa)
Smal_2764PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcv:XCV1326 TonB-dependent outer membrane receptor. (776 aa)
Smal_2871PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xom:XOO_4140 hypothetical protein. (935 aa)
Smal_2872PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_1099 TonB-dependent receptor. (982 aa)
Smal_2873PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: saz:Sama_2025 prolyl oligopeptidase family protein. (677 aa)
Smal_3061PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcv:XCV3187 TonB-dependent outer membrane receptor. (985 aa)
Smal_3134KEGG: xcc:XCC3032 hypothetical protein. (213 aa)
Smal_3139PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xfn:XfasM23_1277 TonB-dependent receptor. (795 aa)
Smal_3197PFAM: peptidase M20; peptidase M28; KEGG: xac:XAC3309 aminopeptidase. (473 aa)
Smal_3556PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC3444 TonB-dependent receptor. (944 aa)
Smal_3865PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: xcb:XC_4051 dipeptidyl peptidase IV. (741 aa)
Smal_3959PFAM: protein of unknown function DUF885; KEGG: xcb:XC_4129 hypothetical protein. (590 aa)
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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