STRINGSTRING
Smal_0739 Smal_0739 Smal_2407 Smal_2407 Smal_2904 Smal_2904 Smal_3321 Smal_3321 Smal_3363 Smal_3363 Smal_3426 Smal_3426
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smal_0739PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC2193 TonB-dependent receptor. (912 aa)
Smal_2407KEGG: xcc:XCC2402 hypothetical protein. (362 aa)
Smal_2904PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xfn:XfasM23_1806 TonB-dependent receptor. (944 aa)
Smal_3321PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xoo:XOO0950 TonB-dependent receptor. (987 aa)
Smal_3363PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC4368 TonB-dependent receptor. (765 aa)
Smal_3426PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_0292 TonB-dependent receptor. (902 aa)
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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