STRINGSTRING
Smal_0071 Smal_0071 Smal_0072 Smal_0072 Smal_0073 Smal_0073 Smal_0074 Smal_0074 Smal_0075 Smal_0075 Smal_0076 Smal_0076 Smal_0077 Smal_0077 Smal_2553 Smal_2553 Smal_3068 Smal_3068 Smal_3223 Smal_3223 Smal_3224 Smal_3224 Smal_3225 Smal_3225 Smal_3226 Smal_3226 Smal_3227 Smal_3227 Smal_3667 Smal_3667 Smal_3668 Smal_3668 Smal_3669 Smal_3669
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smal_0071PFAM: beta-lactamase; KEGG: fjo:Fjoh_3817 beta-lactamase. (373 aa)
Smal_0072Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: csa:Csal_2540 transcriptional regulator, AraC family. (315 aa)
Smal_0073KEGG: fph:Fphi_0921 hypothetical protein. (128 aa)
Smal_0074PFAM: major facilitator superfamily MFS_1; KEGG: fph:Fphi_0920 putative transmembrane transport protein. (406 aa)
Smal_0075PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aci:ACIAD2116 putative ferric siderophore receptor protein. (751 aa)
Smal_0076Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: xac:XAC0069 methicillin resistance protein. (128 aa)
Smal_0077PFAM: peptidase M56 BlaR1; KEGG: xcv:XCV0046 BlaR1 peptidase M56 family membrane protein. (664 aa)
Smal_2553PFAM: beta-lactamase; KEGG: fjo:Fjoh_2768 beta-lactamase. (478 aa)
Smal_3068PFAM: beta-lactamase; KEGG: xcb:XC_1235 beta-lactamase. (466 aa)
Smal_3223KEGG: xcb:XC_0914 hypothetical protein. (187 aa)
Smal_3224TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; peptidase M56 BlaR1; KEGG: xom:XOO_1086 TonB-like protein. (413 aa)
Smal_3225Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: xac:XAC3363 transcriptional regulator BlaI family. (121 aa)
Smal_3226PFAM: flavin reductase domain protein FMN-binding; KEGG: xcb:XC_0913 hypothetical protein. (185 aa)
Smal_3227KEGG: xcv:XCV3482 hypothetical protein. (650 aa)
Smal_3667Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: sdn:Sden_0578 penicillinase repressor. (130 aa)
Smal_3668PFAM: Ankyrin; peptidase M56 BlaR1; KEGG: sdn:Sden_0579 peptidase M56, BlaR1. (509 aa)
Smal_3669PFAM: beta-lactamase; KEGG: sus:Acid_1314 beta-lactamase. (507 aa)
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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