STRINGSTRING
Smal_1164 Smal_1164 Smal_1513 Smal_1513 Smal_1514 Smal_1514 Smal_2048 Smal_2048 Smal_2049 Smal_2049 Smal_2050 Smal_2050 Smal_2063 Smal_2063 Smal_2064 Smal_2064 Smal_2065 Smal_2065 Smal_2066 Smal_2066 Smal_2067 Smal_2067 Smal_2068 Smal_2068 Smal_2069 Smal_2069 Smal_2070 Smal_2070 Smal_2989 Smal_2989 Smal_2990 Smal_2990 Smal_3767 Smal_3767
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smal_1164KEGG: bpt:Bpet2936 hypothetical protein. (200 aa)
Smal_15134Fe-4S ferredoxin iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa)
Smal_1514KEGG: xcv:XCV1809 sugar porter family protein; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (474 aa)
Smal_2048KEGG: gvi:glr3105 hypothetical protein. (487 aa)
Smal_2049Multi-copper enzyme maturase ABC-type transport system permease component-like protein; KEGG: bbt:BBta_3359 putative membrane protein of unknown function. (452 aa)
Smal_2050PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fjo:Fjoh_3330 ABC transporter related. (236 aa)
Smal_2063KEGG: xac:XAC2495 hypothetical protein. (163 aa)
Smal_2064PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mmr:Mmar10_0254 transcriptional regulator, GntR family. (247 aa)
Smal_2065PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sde:Sde_2991 hypothetical protein. (963 aa)
Smal_2066KEGG: pha:PSHAa1749 alginate lyase precursor. (479 aa)
Smal_2067PFAM: Heparinase II/III family protein; KEGG: sde:Sde_3284 hypothetical protein. (744 aa)
Smal_2068PFAM: major facilitator superfamily MFS_1; KEGG: spu:767491 similar to CG3036-PA. (434 aa)
Smal_2069PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mmr:Mmar10_0259 short-chain dehydrogenase/reductase SDR. (250 aa)
Smal_2070PFAM: lipolytic protein G-D-S-L family; KEGG: xcb:XC_0121 hypothetical protein. (395 aa)
Smal_2989PFAM: protein of unknown function DUF819; KEGG: xcv:XCV3040 hypothetical protein. (416 aa)
Smal_2990PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pat:Patl_1435 glyoxalase/bleomycin resistance protein/dioxygenase. (129 aa)
Smal_3767KEGG: par:Psyc_1584 hypothetical protein. (106 aa)
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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