STRINGSTRING
Smal_1133 Smal_1133 Smal_1491 Smal_1491 Smal_1909 Smal_1909 Smal_2017 Smal_2017 Smal_2144 Smal_2144 Smal_2187 Smal_2187 Smal_2218 Smal_2218 Smal_2302 Smal_2302 Smal_2388 Smal_2388 Smal_2623 Smal_2623 Smal_2980 Smal_2980 Smal_3315 Smal_3315
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smal_1133anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: psp:PSPPH_2117 FecR protein superfamily. (322 aa)
Smal_1491anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: xac:XAC4130 transmembrane sensor. (340 aa)
Smal_1909Putative anti-sigma-28 factor, FlgM; KEGG: xcb:XC_2231 flagellar protein. (101 aa)
Smal_2017anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor. (345 aa)
Smal_2144anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pae:PA1364 probable transmembrane sensor. (283 aa)
Smal_2187anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: eca:ECA1539 putative transmembrane sensor protein. (318 aa)
Smal_2218KEGG: mms:mma_2362 Fe2+-dicitrate sensor, membrane component. (326 aa)
Smal_2302anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: mms:mma_1234 Fe2+-dicitrate sensor, membrane component. (314 aa)
Smal_2388anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: nwi:Nwi_3044 FecR protein. (308 aa)
Smal_2623KEGG: xcv:XCV1588 putative secreted protein. (295 aa)
Smal_2980PFAM: Anti sigma-E protein RseA family protein; KEGG: xac:XAC1320 regulatory protein. (293 aa)
Smal_3315anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pen:PSEEN0275 FecR-like transmembrane sensor. (312 aa)
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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