STRINGSTRING
Smal_2233 Smal_2233 Smal_2234 Smal_2234 Smal_2235 Smal_2235 Smal_2236 Smal_2236 Smal_3632 Smal_3632 Smal_0994 Smal_0994
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smal_2233KEGG: abo:ABO_0543 respiratory nitrate reductase 1 gamma chain; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit. (235 aa)
Smal_2234TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: maq:Maqu_3084 nitrate reductase molybdenum cofactor assembly chaperone. (226 aa)
Smal_2235TIGRFAM: nitrate reductase, beta subunit; KEGG: hch:HCH_04010 nitrate reductase, beta subunit. (514 aa)
Smal_2236TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: maq:Maqu_3086 nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1247 aa)
Smal_3632Flavodoxin/nitric oxide synthase; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; KEGG: xoo:XOO0407 iron-uptake factor. (840 aa)
Smal_0994PFAM: Rieske [2Fe-2S] domain protein; KEGG: xac:XAC2940 benzene 1,2-dioxygenase ferredoxin protein. (110 aa)
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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