STRINGSTRING
Smal_0926 Smal_0926 Smal_1771 Smal_1771 Smal_1808 Smal_1808 Smal_2311 Smal_2311 Smal_2399 Smal_2399 Smal_2454 Smal_2454 Smal_2798 Smal_2798
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smal_0926Transcriptional regulator, MerR family; TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: xac:XAC3000 transcriptional regulator SoxR family. (144 aa)
Smal_1771Transcriptional regulator, MerR family; TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: xcv:XCV2335 transcriptional regulator, MerR family. (151 aa)
Smal_1808PFAM: regulatory protein MerR; KEGG: azo:azo1478 probable MerR-family transcriptional regulator. (131 aa)
Smal_2311Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pap:PSPA7_5849 probable transcriptional regulator. (135 aa)
Smal_2399Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: met:M446_0747 transcriptional regulator, MerR family. (132 aa)
Smal_2454Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: pmy:Pmen_3219 transcriptional regulator, MerR family. (159 aa)
Smal_2798Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; KEGG: xom:XOO_3020 hypothetical protein. (118 aa)
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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