STRINGSTRING
Smal_3668 Smal_3668 Smal_0077 Smal_0077 Smal_3224 Smal_3224
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smal_3668PFAM: Ankyrin; peptidase M56 BlaR1; KEGG: sdn:Sden_0579 peptidase M56, BlaR1. (509 aa)
Smal_0077PFAM: peptidase M56 BlaR1; KEGG: xcv:XCV0046 BlaR1 peptidase M56 family membrane protein. (664 aa)
Smal_3224TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; peptidase M56 BlaR1; KEGG: xom:XOO_1086 TonB-like protein. (413 aa)
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
Server load: low (16%) [HD]