STRINGSTRING
Smal_3085 Smal_3085 Smal_1849 Smal_1849 Smal_1852 Smal_1852 Smal_1855 Smal_1855 Smal_1859 Smal_1859 Smal_1907 Smal_1907 Smal_3083 Smal_3083 Smal_3087 Smal_3087
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smal_3085CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: xcc:XCC2921 PilL protein. (2212 aa)
Smal_1849PFAM: CheW domain protein; KEGG: xcb:XC_2318 chemotaxis protein. (163 aa)
Smal_1852CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: xcb:XC_2303 chemotaxis protein. (664 aa)
Smal_1855PFAM: CheW domain protein; KEGG: xcv:XCV1959 chemotaxis signal transduction protein. (429 aa)
Smal_1859CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: xom:XOO_2483 chemotaxis related protein. (614 aa)
Smal_1907PFAM: response regulator receiver; CheW domain protein; KEGG: xcb:XC_2233 chemotaxis protein. (314 aa)
Smal_3083PFAM: CheW domain protein; KEGG: xac:XAC3096 hypothetical protein. (154 aa)
Smal_3087PFAM: CheW domain protein; KEGG: xcb:XC_1185 pilus biogenesis protein. (176 aa)
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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