STRINGSTRING
Smal_2269 Smal_2269 Smal_0477 Smal_0477 Smal_0645 Smal_0645 Smal_0739 Smal_0739 Smal_0783 Smal_0783 Smal_0988 Smal_0988 Smal_0992 Smal_0992 Smal_1492 Smal_1492 Smal_1557 Smal_1557 Smal_2308 Smal_2308 Smal_2636 Smal_2636 Smal_3363 Smal_3363
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smal_2269PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcb:XC_4325 TonB-dependent receptor. (772 aa)
Smal_0477PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC3613 TonB-dependent receptor. (879 aa)
Smal_0645TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcb:XC_3463 outer membrane hemin receptor. (750 aa)
Smal_0739PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC2193 TonB-dependent receptor. (912 aa)
Smal_0783PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xom:XOO_0893 colicin I receptor. (708 aa)
Smal_0988PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hne:HNE_1653 TonB-dependent receptor. (806 aa)
Smal_0992TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_0864 outer membrane ferric siderophore receptor. (762 aa)
Smal_1492PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1341 TonB-dependent outer membrane receptor. (977 aa)
Smal_1557PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcv:XCV2702 TonB-dependent outer membrane receptor. (853 aa)
Smal_2308TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: reu:Reut_B4646 TonB-dependent siderophore receptor. (693 aa)
Smal_2636PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC4368 TonB-dependent receptor. (747 aa)
Smal_3363PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC4368 TonB-dependent receptor. (765 aa)
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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