STRINGSTRING
Sare_0692 Sare_0692 Sare_0739 Sare_0739 Sare_0875 Sare_0875 Sare_0881 Sare_0881 Sare_0882 Sare_0882 Sare_1071 Sare_1071 Sare_1264 Sare_1264 Sare_1266 Sare_1266 Sare_1267 Sare_1267 Sare_2017 Sare_2017 Sare_2018 Sare_2018 Sare_2034 Sare_2034 Sare_2035 Sare_2035 Sare_2046 Sare_2046 Sare_2049 Sare_2049 Sare_2096 Sare_2096 Sare_2184 Sare_2184 Sare_2335 Sare_2335 Sare_2336 Sare_2336 Sare_2337 Sare_2337 Sare_2338 Sare_2338 Sare_2339 Sare_2339 Sare_2340 Sare_2340 Sare_2363 Sare_2363 Sare_2759 Sare_2759 Sare_2945 Sare_2945 Sare_4987 Sare_4987 Sare_5019 Sare_5019
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_0692PFAM: Nucleotidyl transferase; KEGG: stp:Strop_0745 putative UTP-glucose-1-phosphate uridylyltransferase GalU. (318 aa)
Sare_0739TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: stp:Strop_0795 UDP-glucose 4-epimerase. (327 aa)
Sare_0875PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: stp:Strop_0933 UDP-glucose 6-dehydrogenase. (475 aa)
Sare_0881PFAM: glycosyl transferase group 1; KEGG: stp:Strop_0939 glycosyl transferase, group 1. (381 aa)
Sare_0882Mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; KEGG: stp:Strop_0940 mannose-1-phosphate guanylyltransferase (GDP). (363 aa)
Sare_1071dTDP-4-dehydrorhamnose reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: stp:Strop_1177 dTDP-4-dehydrorhamnose reductase. (279 aa)
Sare_1264DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: sus:Acid_2248 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (435 aa)
Sare_1266PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: stp:Strop_2218 oxidoreductase domain protein. (336 aa)
Sare_1267PFAM: NDP-hexose 23-dehydratase; KEGG: sen:SACE_0717 NDP-4-keto-6-deoxy-glucose 2,3-dehydratase. (480 aa)
Sare_2017dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (297 aa)
Sare_2018PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: sen:SACE_0714 dTDP-4-deoxyglucose 3,5-epimerase. (187 aa)
Sare_2034PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mth:MTH1188 pleiotropic regulatory protein DegT; Belongs to the DegT/DnrJ/EryC1 family. (376 aa)
Sare_2035PFAM: aldo/keto reductase; KEGG: sma:SAV952 dTDP-4-keto-6-deoxy-L-hexose 2,3-reductase. (341 aa)
Sare_2046KEGG: stp:Strop_2056 hypothetical protein. (257 aa)
Sare_2049PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sen:SACE_0718 TDP-desosamine-N-dimethyltransferase. (242 aa)
Sare_2096TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: ace:Acel_0413 glucose-1-phosphate thymidyltransferase. (353 aa)
Sare_2184TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: nfa:nfa2070 putative glucose-1-phosphate thymidyltransferase. (297 aa)
Sare_2335Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (307 aa)
Sare_2336TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: stp:Strop_2222 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (357 aa)
Sare_2337PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gur:Gura_4276 glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family. (373 aa)
Sare_2338PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: sma:SAV949 dTDP-4-keto-6-deoxyhexose 3,5-epimerase. (200 aa)
Sare_2339PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: stp:Strop_2216 NAD-dependent epimerase/dehydratase. (334 aa)
Sare_2340PFAM: NDP-hexose 23-dehydratase; KEGG: sma:SAV950 dTDP-4-keto-6-deoxy-L-hexose2,3-dehydratase. (465 aa)
Sare_2363TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: stp:Strop_2246 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (324 aa)
Sare_2759PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: sen:SACE_3345 UDP-glucose 4-epimerase. (370 aa)
Sare_2945PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: pth:PTH_2574 predicted pyridoxal phosphate-dependent enzyme; Belongs to the DegT/DnrJ/EryC1 family. (378 aa)
Sare_4987PFAM: glycosyl transferase family 2; KEGG: stp:Strop_4474 glycosyl transferase, family 2. (235 aa)
Sare_5019PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: stp:Strop_4509 NAD-dependent epimerase/dehydratase. (325 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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