STRINGSTRING
Sare_0352 Sare_0352 Sare_0357 Sare_0357 Sare_0362 Sare_0362 Sare_0363 Sare_0363 Sare_1246 Sare_1246 Sare_1247 Sare_1247 Sare_1248 Sare_1248 Sare_1249 Sare_1249 Sare_1250 Sare_1250 Sare_1269 Sare_1269 Sare_2072 Sare_2072 Sare_2077 Sare_2077 Sare_2078 Sare_2078 Sare_2079 Sare_2079 Sare_2097 Sare_2097 Sare_2407 Sare_2407 Sare_2961 Sare_2961 Sare_2962 Sare_2962 Sare_3010 Sare_3010 Sare_3148 Sare_3148 Sare_3151 Sare_3151 Sare_3152 Sare_3152 Sare_3153 Sare_3153 Sare_3154 Sare_3154 Sare_3156 Sare_3156 Sare_3282 Sare_3282 Sare_4555 Sare_4555 Sare_4562 Sare_4562 Sare_4563 Sare_4563 Sare_4890 Sare_4890 Sare_4891 Sare_4891 Sare_4895 Sare_4895 Sare_4896 Sare_4896 Sare_4933 Sare_4933 Sare_4951 Sare_4951
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_0352PFAM: MbtH domain protein; KEGG: sma:SAV3644 putative MbtH-like protein. (63 aa)
Sare_0357TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_4110 putative non-ribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family. (490 aa)
Sare_0362TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: sma:SAV3642 putative non-ribosomal peptide synthetase. (2350 aa)
Sare_0363TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase. (2125 aa)
Sare_1246PFAM: AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: stp:Strop_2768 beta-ketoacyl synthase. (5154 aa)
Sare_1247Beta-ketoacyl synthase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: stp:Strop_2768 beta-ketoacyl synthase. (5255 aa)
Sare_1248Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: sma:SAV418 modular polyketide synthase. (1831 aa)
Sare_1249Beta-ketoacyl synthase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; Erythronolide synthase docking; KEGG: sma:SAV418 modular polyketide synthase. (1789 aa)
Sare_1250Acyl transferase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Male sterility domain; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; Erythronolide synthase docking; KEGG: sma:SAV418 modular polyketide synthase. (3494 aa)
Sare_1269Oleoyl-(acyl-carrier-protein) hydrolase; PFAM: Thioesterase; KEGG: stp:Strop_2763 thioesterase. (256 aa)
Sare_2072Beta-ketoacyl synthase; PFAM: Thioesterase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: stp:Strop_2654 beta-ketoacyl synthase. (2243 aa)
Sare_2077PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: stp:Strop_2649 methyltransferase type 12. (456 aa)
Sare_2078PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: stp:Strop_2648 methyltransferase type 12. (493 aa)
Sare_2079PFAM: condensation domain protein; phosphopantetheine-binding; KEGG: stp:Strop_2647 condensation domain protein. (670 aa)
Sare_2097PFAM: condensation domain protein; KEGG: stp:Strop_2721 condensation domain protein. (445 aa)
Sare_2407TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: sde:Sde_3725 polyketide synthase modules and related proteins-like. (3101 aa)
Sare_2961TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase. (2201 aa)
Sare_2962TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase. (1356 aa)
Sare_3010PFAM: AMP-dependent synthetase and ligase; KEGG: stp:Strop_4144 AMP-dependent synthetase and ligase. (561 aa)
Sare_3148TIGRFAM: thioester reductase domain; PFAM: AMP-dependent synthetase and ligase; NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; Male sterility domain; KEGG: msm:MSMEG_2956 NAD dependent epimerase/dehydratase family protein. (1165 aa)
Sare_3151Beta-ketoacyl synthase; PFAM: Thioesterase; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; Erythronolide synthase docking; KEGG: sen:SACE_4139 type I modular polyketide synthase. (2367 aa)
Sare_3152Beta-ketoacyl synthase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; Erythronolide synthase docking; KEGG: sma:SAV416 modular polyketide synthase. (1548 aa)
Sare_3153Acyl transferase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; Erythronolide synthase docking; KEGG: sma:SAV418 modular polyketide synthase. (3508 aa)
Sare_3154Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; Erythronolide synthase docking; KEGG: sen:SACE_4139 type I modular polyketide synthase. (2060 aa)
Sare_3156Beta-ketoacyl synthase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: sma:SAV419 modular polyketide synthase. (7279 aa)
Sare_3282TIGRFAM: thioester reductase domain; PFAM: GCN5-related N-acetyltransferase; AMP-dependent synthetase and ligase; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; Male sterility domain; Beta-ketoacyl synthase; Acyl transferase; KEGG: stp:Strop_3056 thioester reductase domain. (2374 aa)
Sare_4555PFAM: Thioesterase; KEGG: bbt:BBta_1970 putative thiesterase family protein. (242 aa)
Sare_4562TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase. (7785 aa)
Sare_4563PFAM: MbtH domain protein; KEGG: sco:SCO3218 putative small conserved hypothetical protein. (71 aa)
Sare_4890TIGRFAM: amino acid adenylation domain; thioester reductase domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; Male sterility domain; KEGG: stp:Strop_4416 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family. (1500 aa)
Sare_4891TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: stp:Strop_4417 amino acid adenylation domain. (1104 aa)
Sare_4895TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: stp:Strop_4420 amino acid adenylation domain. (1035 aa)
Sare_4896PFAM: MbtH domain protein; KEGG: stp:Strop_4421 MbtH domain protein. (69 aa)
Sare_4933PFAM: AMP-dependent synthetase and ligase; KEGG: tfu:Tfu_1871 2,3-dihydroxybenzoate-AMP ligase. (555 aa)
Sare_4951Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: sen:SACE_5532 iterative type I polyketide synthase. (1835 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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