STRINGSTRING
Sare_2819 Sare_2819 Sare_2820 Sare_2820 Sare_2821 Sare_2821 Sare_2822 Sare_2822 Sare_2823 Sare_2823
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_2819KEGG: stp:Strop_2621 hypothetical protein. (389 aa)
Sare_2820KEGG: stp:Strop_2622 hypothetical protein. (129 aa)
Sare_2821PFAM: protein of unknown function DUF35; KEGG: stp:Strop_2623 protein of unknown function DUF35. (315 aa)
Sare_2822PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_2624 acyl-CoA dehydrogenase domain protein. (750 aa)
Sare_2823Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: stp:Strop_2625 regulatory protein, TetR. (206 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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