STRINGSTRING
Sare_0354 Sare_0354 Sare_0571 Sare_0571 Sare_1046 Sare_1046 Sare_2151 Sare_2151 Sare_2594 Sare_2594 Sare_2737 Sare_2737 Sare_2738 Sare_2738 Sare_2739 Sare_2739 Sare_2740 Sare_2740 Sare_2745 Sare_2745 Sare_2746 Sare_2746 Sare_2949 Sare_2949
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_0354Diaminobutyrate--2-oxoglutarate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (430 aa)
Sare_0571L-lysine 6-monooxygenase (NADPH); KEGG: lpf:lpl1946 lysine N6-hydroxylase. (434 aa)
Sare_1046KEGG: fra:Francci3_3275 L-lysine 6-monooxygenase (NADPH). (437 aa)
Sare_2151KEGG: bch:Bcen2424_1643 lysine/ornithine N-monooxygenase. (431 aa)
Sare_2594KEGG: stp:Strop_2439 hypothetical protein. (187 aa)
Sare_2737PFAM: IucA/IucC family protein; KEGG: stp:Strop_2548 IucA/IucC family protein. (596 aa)
Sare_2738KEGG: stp:Strop_2549 hypothetical protein. (188 aa)
Sare_2739KEGG: stp:Strop_2550 L-lysine 6-monooxygenase (NADPH). (428 aa)
Sare_2740PFAM: Pyridoxal-dependent decarboxylase; KEGG: stp:Strop_2551 pyridoxal-dependent decarboxylase. (530 aa)
Sare_2745PFAM: peptidase S45 penicillin amidase; KEGG: stp:Strop_2556 penicillin amidase. (692 aa)
Sare_2746KEGG: stp:Strop_2557 hypothetical protein. (191 aa)
Sare_2949PFAM: Pyridoxal-dependent decarboxylase; KEGG: fra:Francci3_4055 pyridoxal-dependent decarboxylase. (502 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.