STRINGSTRING
Sare_0391 Sare_0391 Sare_0392 Sare_0392 Sare_0393 Sare_0393 Sare_0747 Sare_0747 Sare_0748 Sare_0748 Sare_0749 Sare_0749 Sare_1078 Sare_1078 Sare_1079 Sare_1079 Sare_1080 Sare_1080 Sare_1081 Sare_1081 Sare_1082 Sare_1082 Sare_1083 Sare_1083 Sare_1084 Sare_1084 Sare_1506 Sare_1506 Sare_1507 Sare_1507 Sare_1508 Sare_1508 Sare_2550 Sare_2550 Sare_2551 Sare_2551 Sare_2552 Sare_2552 Sare_2553 Sare_2553 Sare_2997 Sare_2997 Sare_2998 Sare_2998 Sare_2999 Sare_2999 Sare_3000 Sare_3000 Sare_3001 Sare_3001 Sare_3002 Sare_3002 Sare_3003 Sare_3003 Sare_3004 Sare_3004 Sare_3005 Sare_3005 Sare_3006 Sare_3006 Sare_3007 Sare_3007 Sare_3204 Sare_3204 Sare_3205 Sare_3205 Sare_3206 Sare_3206 Sare_3207 Sare_3207 Sare_3208 Sare_3208 Sare_3209 Sare_3209 Sare_3490 Sare_3490 Sare_3491 Sare_3491 Sare_3492 Sare_3492 Sare_3493 Sare_3493 Sare_3494 Sare_3494 Sare_3967 Sare_3967 Sare_3968 Sare_3968 Sare_3969 Sare_3969 Sare_3970 Sare_3970 Sare_4657 Sare_4657
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_0391PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_1559 binding-protein-dependent transport systems inner membrane component. (277 aa)
Sare_0392PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_1558 binding-protein-dependent transport systems inner membrane component. (328 aa)
Sare_0393PFAM: extracellular solute-binding protein family 1; KEGG: tfu:Tfu_0934 putative solute binding lipoprotein. (434 aa)
Sare_0747PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_0803 extracellular solute-binding protein, family 1. (433 aa)
Sare_0748PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_0804 binding-protein-dependent transport systems inner membrane component. (337 aa)
Sare_0749PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_0805 binding-protein-dependent transport systems inner membrane component. (306 aa)
Sare_1078KEGG: stp:Strop_1185 hypothetical protein. (425 aa)
Sare_1079Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: stp:Strop_1186 regulatory protein, LacI. (347 aa)
Sare_1080PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_1187 extracellular solute-binding protein, family 1. (426 aa)
Sare_1081PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_1188 binding-protein-dependent transport systems inner membrane component. (290 aa)
Sare_1082PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_1189 binding-protein-dependent transport systems inner membrane component. (304 aa)
Sare_1083Glycoside hydrolase family 85; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 85; KEGG: stp:Strop_1190 glycoside hydrolase, family 85. (807 aa)
Sare_1084PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; Glycoside hydrolase family 38 central region; KEGG: stp:Strop_1191 glycoside hydrolase, family 38. (1398 aa)
Sare_1506PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_1557 extracellular solute-binding protein, family 1. (428 aa)
Sare_1507PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_1558 binding-protein-dependent transport systems inner membrane component. (323 aa)
Sare_1508PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_1559 binding-protein-dependent transport systems inner membrane component. (280 aa)
Sare_2550PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_2401 binding-protein-dependent transport systems inner membrane component. (289 aa)
Sare_2551PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: stp:Strop_2402 ABC transporter related. (347 aa)
Sare_2552PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_2403 extracellular solute-binding protein, family 1. (443 aa)
Sare_2553PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_2404 binding-protein-dependent transport systems inner membrane component. (273 aa)
Sare_2997KEGG: sma:SAV1843 hypothetical protein. (390 aa)
Sare_2998PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: smd:Smed_3725 GntR domain protein. (240 aa)
Sare_2999PFAM: extracellular solute-binding protein family 1; KEGG: sco:SCO0065 putative extracellular binding protein. (419 aa)
Sare_3000PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO0066 putative integral membrane permease. (318 aa)
Sare_3001PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO0067 putative integral membrane permease. (271 aa)
Sare_3002PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMa0059 hypothetical protein. (266 aa)
Sare_3003PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sus:Acid_2667 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein. (419 aa)
Sare_3004PFAM: Acetyl xylan esterase; KEGG: sma:SAV1302 putative cephalosporin C deacetylase. (325 aa)
Sare_3005PFAM: KDPG and KHG aldolase; KEGG: sco:SCO3495 putative 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase. (201 aa)
Sare_3006PFAM: PfkB domain protein; KEGG: psp:PSPPH_2667 2-dehydro-3-deoxygluconokinase. (325 aa)
Sare_3007KEGG: aba:Acid345_0655 hypothetical protein. (694 aa)
Sare_3204PFAM: DNA-directed DNA polymerase; KEGG: stp:Strop_2980 DNA-directed DNA polymerase. (566 aa)
Sare_3205PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_2981 binding-protein-dependent transport systems inner membrane component. (319 aa)
Sare_3206PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_2982 binding-protein-dependent transport systems inner membrane component. (313 aa)
Sare_3207PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_2983 extracellular solute-binding protein, family 1. (467 aa)
Sare_3208Hypothetical protein. (59 aa)
Sare_3209Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: stp:Strop_2984 sugar isomerase (SIS). (320 aa)
Sare_3490PFAM: PfkB domain protein; KEGG: stp:Strop_3260 PfkB domain protein. (320 aa)
Sare_3491PFAM: N-acylglucosamine 2-epimerase; KEGG: stp:Strop_3261 N-acylglucosamine 2-epimerase. (425 aa)
Sare_3492PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_3262 binding-protein-dependent transport systems inner membrane component. (299 aa)
Sare_3493PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_3263 binding-protein-dependent transport systems inner membrane component. (298 aa)
Sare_3494PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_3264 extracellular solute-binding protein, family 1. (414 aa)
Sare_3967PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_3587 extracellular solute-binding protein, family 1. (448 aa)
Sare_3968PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_3588 binding-protein-dependent transport systems inner membrane component. (350 aa)
Sare_3969PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_3589 binding-protein-dependent transport systems inner membrane component. (320 aa)
Sare_3970Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: nca:Noca_3918 periplasmic binding protein/LacI transcriptional regulator. (348 aa)
Sare_4657PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: stp:Strop_4220 ABC transporter related. (363 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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