STRINGSTRING
Sare_2407 Sare_2407 Sare_2962 Sare_2962 Sare_3151 Sare_3151 Sare_3154 Sare_3154 Sare_3282 Sare_3282 Sare_3156 Sare_3156 fabH fabH Sare_4562 Sare_4562 Sare_0362 Sare_0362 Sare_0363 Sare_0363 Sare_0484 Sare_0484 Sare_0551 Sare_0551 Sare_1058 Sare_1058 Sare_1247 Sare_1247 Sare_1250 Sare_1250 Sare_2029 Sare_2029 Sare_2030 Sare_2030 Sare_4890 Sare_4890 Sare_4951 Sare_4951 Sare_2069 Sare_2069 Sare_2072 Sare_2072 Sare_2077 Sare_2077 Sare_2154 Sare_2154
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Sare_2407TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: sde:Sde_3725 polyketide synthase modules and related proteins-like. (3101 aa)
Sare_2962TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase. (1356 aa)
Sare_3151Beta-ketoacyl synthase; PFAM: Thioesterase; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; Erythronolide synthase docking; KEGG: sen:SACE_4139 type I modular polyketide synthase. (2367 aa)
Sare_3154Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; Erythronolide synthase docking; KEGG: sen:SACE_4139 type I modular polyketide synthase. (2060 aa)
Sare_3282TIGRFAM: thioester reductase domain; PFAM: GCN5-related N-acetyltransferase; AMP-dependent synthetase and ligase; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; Male sterility domain; Beta-ketoacyl synthase; Acyl transferase; KEGG: stp:Strop_3056 thioester reductase domain. (2374 aa)
Sare_3156Beta-ketoacyl synthase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: sma:SAV419 modular polyketide synthase. (7279 aa)
fabH3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (314 aa)
Sare_4562TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase. (7785 aa)
Sare_0362TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: sma:SAV3642 putative non-ribosomal peptide synthetase. (2350 aa)
Sare_0363TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase. (2125 aa)
Sare_0484PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: plu:plu0757 hypothetical protein. (310 aa)
Sare_0551Erythronolide synthase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: stp:Strop_2697 beta-ketoacyl synthase. (1935 aa)
Sare_1058PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: ppu:PP_3787 hypothetical protein. (308 aa)
Sare_1247Beta-ketoacyl synthase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: stp:Strop_2768 beta-ketoacyl synthase. (5255 aa)
Sare_1250Acyl transferase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Male sterility domain; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; Erythronolide synthase docking; KEGG: sma:SAV418 modular polyketide synthase. (3494 aa)
Sare_2029Beta-ketoacyl synthase; PFAM: phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: sen:SACE_5308 iterative type I polyketide synthase. (1263 aa)
Sare_2030PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: sen:SACE_5307 3-oxoacyl-ACP synthase III. (343 aa)
Sare_4890TIGRFAM: amino acid adenylation domain; thioester reductase domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; Male sterility domain; KEGG: stp:Strop_4416 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family. (1500 aa)
Sare_4951Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: sen:SACE_5532 iterative type I polyketide synthase. (1835 aa)
Sare_2069PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: sma:SAV1374 3-oxoacyl-ACP synthase III. (340 aa)
Sare_2072Beta-ketoacyl synthase; PFAM: Thioesterase; condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: stp:Strop_2654 beta-ketoacyl synthase. (2243 aa)
Sare_2077PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: stp:Strop_2649 methyltransferase type 12. (456 aa)
Sare_2154PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: tth:TTC0343 3-oxoacyl-(acyl carrier protein) synthase. (343 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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