STRINGSTRING
Sare_0489 Sare_0489 Sare_4769 Sare_4769 Sare_4766 Sare_4766 Sare_4715 Sare_4715 Sare_4695 Sare_4695 Sare_4464 Sare_4464 Sare_4407 Sare_4407 Sare_4366 Sare_4366 Sare_4365 Sare_4365 Sare_4264 Sare_4264 Sare_4150 Sare_4150 Sare_4139 Sare_4139 Sare_3978 Sare_3978 Sare_3945 Sare_3945 Sare_3838 Sare_3838 Sare_3819 Sare_3819 Sare_3809 Sare_3809 Sare_3414 Sare_3414 Sare_3250 Sare_3250 Sare_3226 Sare_3226 Sare_3056 Sare_3056 Sare_3055 Sare_3055 Sare_2887 Sare_2887 Sare_2886 Sare_2886 Sare_2884 Sare_2884 Sare_2883 Sare_2883 Sare_2879 Sare_2879 Sare_2829 Sare_2829 Sare_2826 Sare_2826 Sare_2822 Sare_2822 Sare_2818 Sare_2818 Sare_2817 Sare_2817 Sare_2816 Sare_2816 Sare_2814 Sare_2814 Sare_2809 Sare_2809 Sare_2808 Sare_2808 Sare_2713 Sare_2713 Sare_2536 Sare_2536 Sare_2468 Sare_2468 Sare_2409 Sare_2409 Sare_2377 Sare_2377 Sare_2174 Sare_2174 Sare_2117 Sare_2117 Sare_2098 Sare_2098 Sare_2089 Sare_2089 pyrD pyrD Sare_1707 Sare_1707 Sare_1706 Sare_1706 Sare_1691 Sare_1691 Sare_1688 Sare_1688 Sare_1511 Sare_1511 Sare_1475 Sare_1475 dapB dapB Sare_1291 Sare_1291 Sare_1049 Sare_1049 Sare_0885 Sare_0885 Sare_0876 Sare_0876 Sare_0808 Sare_0808 Sare_0762 Sare_0762 Sare_0673 Sare_0673 Sare_0575 Sare_0575 Sare_0517 Sare_0517 Sare_0490 Sare_0490 Sare_0483 Sare_0483 Sare_0171 Sare_0171 Sare_0142 Sare_0142 Sare_0086 Sare_0086 Sare_0034 Sare_0034
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_0489Hypothetical protein. (198 aa)
Sare_4769PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_4329 acyl-CoA dehydrogenase domain protein. (387 aa)
Sare_4766PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_4326 acyl-CoA dehydrogenase domain protein. (394 aa)
Sare_4715L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (572 aa)
Sare_4695PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_4265 acyl-CoA dehydrogenase, type 2, C-terminal domain. (387 aa)
Sare_4464TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; KEGG: stp:Strop_4066 geranylgeranyl reductase. (423 aa)
Sare_4407TIGRFAM: FAD-linked oxidoreductase; PFAM: FAD linked oxidase domain protein; D-arabinono-14-lactone oxidase; KEGG: stp:Strop_4026 FAD-linked oxidoreductase. (437 aa)
Sare_4366PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_3981 acyl-CoA dehydrogenase domain protein. (542 aa)
Sare_4365PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: stp:Strop_3980 pyridoxamine 5'-phosphate oxidase-related, FMN-binding. (205 aa)
Sare_4264PFAM: protein of unknown function DUF742; KEGG: stp:Strop_3873 protein of unknown function DUF742. (121 aa)
Sare_4150PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_3768 succinate dehydrogenase. (637 aa)
Sare_4139PFAM: Prephenate dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: stp:Strop_3757 prephenate dehydrogenase. (348 aa)
Sare_3978PFAM: protein of unknown function DUF742; KEGG: stp:Strop_3597 protein of unknown function DUF742. (121 aa)
Sare_3945PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: stp:Strop_3566 pyridoxamine 5'-phosphate oxidase-related, FMN-binding. (145 aa)
Sare_3838Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (407 aa)
Sare_3819PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sen:SACE_5168 acyl-CoA dehydrogenase. (667 aa)
Sare_3809Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (391 aa)
Sare_3414PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: stp:Strop_3188 alcohol dehydrogenase, zinc-binding domain protein. (334 aa)
Sare_3250PFAM: short-chain dehydrogenase/reductase SDR; KEGG: stp:Strop_3024 short-chain dehydrogenase/reductase SDR. (255 aa)
Sare_3226PFAM: protein of unknown function DUF742; KEGG: sma:SAV2181 hypothetical protein. (143 aa)
Sare_3056PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_0683 acyl-CoA dehydrogenase, type 2, C-terminal domain. (390 aa)
Sare_3055PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_0684 acyl-CoA dehydrogenase domain protein. (363 aa)
Sare_2887PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_2679 acyl-CoA dehydrogenase domain protein. (339 aa)
Sare_2886PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_2678 acyl-CoA dehydrogenase domain protein. (380 aa)
Sare_2884PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_2676 fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (557 aa)
Sare_2883PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_2675 fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (530 aa)
Sare_2879PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_2671 acyl-CoA dehydrogenase, type 2, C-terminal domain. (390 aa)
Sare_2829PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: stp:Strop_2632 pyridoxamine 5'-phosphate oxidase-related, FMN-binding. (159 aa)
Sare_2826PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_2629 fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (549 aa)
Sare_2822PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_2624 acyl-CoA dehydrogenase domain protein. (750 aa)
Sare_2818PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_2619 acyl-CoA dehydrogenase domain protein. (390 aa)
Sare_2817PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_2618 acyl-CoA dehydrogenase domain protein. (335 aa)
Sare_2816PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_2617 acyl-CoA dehydrogenase domain protein. (411 aa)
Sare_2814PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_2615 acyl-CoA dehydrogenase domain protein. (386 aa)
Sare_2809PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_2610 acyl-CoA dehydrogenase domain protein. (367 aa)
Sare_2808PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_2609 acyl-CoA dehydrogenase domain protein. (401 aa)
Sare_2713PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: stp:Strop_2532 fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (551 aa)
Sare_2536TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; KEGG: stp:Strop_2391 geranylgeranyl reductase. (382 aa)
Sare_2468PFAM: protein of unknown function DUF129; KEGG: stp:Strop_1147 protein of unknown function DUF129. (243 aa)
Sare_2409PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: hma:rrnAC1526 quinone oxidoreductase. (351 aa)
Sare_2377PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_2258 acyl-CoA dehydrogenase domain protein. (381 aa)
Sare_2174PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: mth:MTH836 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (439 aa)
Sare_2117PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: mth:MTH836 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (444 aa)
Sare_2098PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: stp:Strop_2713 4-hydroxyphenylacetate 3-hydroxylase. (525 aa)
Sare_2089PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_2708 acyl-CoA dehydrogenase, type 2, C-terminal domain. (392 aa)
pyrDDihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (338 aa)
Sare_1707TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: stp:Strop_1710 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family. (230 aa)
Sare_1706KEGG: stp:Strop_1709 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (643 aa)
Sare_1691PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; KEGG: stp:Strop_1693 UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (427 aa)
Sare_1688PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: tfu:Tfu_2529 putative UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (418 aa)
Sare_1511PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_1562 acyl-CoA dehydrogenase domain protein. (403 aa)
Sare_1475Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (469 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (256 aa)
Sare_1291PFAM: protein of unknown function DUF742; KEGG: stp:Strop_3597 protein of unknown function DUF742. (125 aa)
Sare_1049PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: fra:Francci3_3276 acyl-CoA dehydrogenase-like. (405 aa)
Sare_0885TIGRFAM: F420-dependent oxidoreductase, putative; PFAM: protein of unknown function DUF129; KEGG: stp:Strop_0943 F420-dependent oxidoreductase, putative. (363 aa)
Sare_0876PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_0934 acyl-CoA dehydrogenase domain protein. (387 aa)
Sare_0808TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; KEGG: stp:Strop_0862 geranylgeranyl reductase. (406 aa)
Sare_0762PFAM: protein of unknown function DUF742; KEGG: stp:Strop_0818 protein of unknown function DUF742. (125 aa)
Sare_0673PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_0727 acyl-CoA dehydrogenase domain protein. (400 aa)
Sare_0575PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: bxe:Bxe_C0508 putative dehydrogenase flavoprotein. (543 aa)
Sare_0517PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_0429 acyl-CoA dehydrogenase domain protein. (386 aa)
Sare_0490PFAM: acyl-CoA dehydrogenase domain protein; KEGG: plu:plu0762 hypothetical protein. (383 aa)
Sare_0483PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: swo:Swol_0617 UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (448 aa)
Sare_0171PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: stp:Strop_0162 hypothetical protein. (126 aa)
Sare_0142PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_0136 acyl-CoA dehydrogenase domain protein. (404 aa)
Sare_0086PFAM: acyl-CoA dehydrogenase domain protein; KEGG: stp:Strop_0089 acyl-CoA dehydrogenase domain protein. (617 aa)
Sare_0034PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: stp:Strop_0028 acyl-CoA dehydrogenase domain protein. (384 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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