STRINGSTRING
Sare_2139 Sare_2139 Sare_0065 Sare_0065 Sare_0148 Sare_0148 Sare_0168 Sare_0168 Sare_0377 Sare_0377 Sare_0409 Sare_0409 Sare_0460 Sare_0460 Sare_0539 Sare_0539 Sare_0540 Sare_0540 Sare_0779 Sare_0779 Sare_0851 Sare_0851 Sare_0996 Sare_0996 hutI hutI hutU hutU Sare_1048 Sare_1048 Sare_1055 Sare_1055 Sare_1147 Sare_1147 Sare_1191 Sare_1191 Sare_1316 Sare_1316 Sare_1413 Sare_1413 dtd dtd Sare_1468 Sare_1468 Sare_1469 Sare_1469 Sare_1704 Sare_1704 pdxT pdxT Sare_1856 Sare_1856 Sare_1914 Sare_1914 Sare_1956 Sare_1956 Sare_2092 Sare_2092 Sare_2098 Sare_2098 egtD egtD Sare_2329 Sare_2329 Sare_2341 Sare_2341 Sare_2381 Sare_2381 Sare_2382 Sare_2382 Sare_2383 Sare_2383 Sare_2384 Sare_2384 gcvP gcvP gcvH gcvH Sare_2672 Sare_2672 Sare_2807 Sare_2807 Sare_2812 Sare_2812 Sare_2819 Sare_2819 Sare_2840 Sare_2840 Sare_2841 Sare_2841 Sare_2851 Sare_2851 Sare_2952 Sare_2952 Sare_2958 Sare_2958 Sare_3003 Sare_3003 Sare_3221 Sare_3221 Sare_3279 Sare_3279 Sare_3548 Sare_3548 Sare_3598 Sare_3598 Sare_3638 Sare_3638 kmo kmo kynU kynU kynA kynA Sare_3986 Sare_3986 Sare_3991 Sare_3991 Sare_4405 Sare_4405 Sare_4470 Sare_4470 Sare_4471 Sare_4471 Sare_4472 Sare_4472 Sare_4561 Sare_4561 Sare_4686 Sare_4686 Sare_4688 Sare_4688 Sare_4704 Sare_4704 Sare_4892 Sare_4892 kmo-2 kmo-2 Sare_4992 Sare_4992 arcA arcA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_2139PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ang:An14g03560 hypothetical protein Pfam: Amidohydro_1 Amidohydro_3. (408 aa)
Sare_0065Zn-dependent hydrolase of the beta-lactamase fold-like protein; KEGG: sen:SACE_7344 hypothetical protein. (264 aa)
Sare_0148TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: stp:Strop_0142 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (430 aa)
Sare_0168PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: stp:Strop_0159 Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (360 aa)
Sare_0377PFAM: protein of unknown function DUF849; KEGG: stp:Strop_0314 protein of unknown function DUF849. (280 aa)
Sare_0409PFAM: Proline dehydrogenase; KEGG: stp:Strop_0342 proline dehydrogenase. (306 aa)
Sare_0460PFAM: aminotransferase class V; Pyridoxal-dependent decarboxylase; KEGG: stp:Strop_0389 pyridoxal-dependent decarboxylase. (500 aa)
Sare_0539KEGG: plu:plu1434 hypothetical protein. (236 aa)
Sare_0540KEGG: plu:plu1436 hypothetical protein. (409 aa)
Sare_0779PFAM: beta-lactamase domain protein; KEGG: stp:Strop_0834 beta-lactamase domain protein. (209 aa)
Sare_0851KEGG: stp:Strop_0908 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (420 aa)
Sare_0996KEGG: stp:Strop_1106 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase. (512 aa)
hutIKEGG: stp:Strop_1107 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3; Belongs to the metallo-dependent hydrolases superfamily. HutI family. (392 aa)
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (549 aa)
Sare_1048PFAM: alanine dehydrogenase/PNT domain protein; KEGG: sma:SAV1788 saccharopine dehydrogenase. (359 aa)
Sare_1055PFAM: fumarate lyase; KEGG: sma:SAV1705 putative 3-carboxy-cis,cis-muconate cycloisomerase. (488 aa)
Sare_1147PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: stp:Strop_1256 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase. (256 aa)
Sare_1191PFAM: amidohydrolase; Amidohydrolase 3; KEGG: stp:Strop_1302 amidohydrolase. (359 aa)
Sare_1316KEGG: stp:Strop_1359 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
Sare_1413F45E12.5a-like protein; KEGG: mcc:710736 similar to F45E12.5a. (72 aa)
dtdD-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (140 aa)
Sare_1468PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: stp:Strop_1526 3-hydroxyacyl-CoA dehydrogenase, NAD-binding. (688 aa)
Sare_1469KEGG: stp:Strop_1527 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
Sare_1704KEGG: stp:Strop_1707 Zn-dependent hydrolase of the beta-lactamase fold-like protein. (385 aa)
pdxTSNO glutamine amidotransferase; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. (201 aa)
Sare_1856Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (404 aa)
Sare_1914KEGG: stp:Strop_1923 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein. (371 aa)
Sare_1956KEGG: mlo:mlr5882 Phosphoenolpyruvate phosphomutase. (278 aa)
Sare_2092KEGG: rme:Rmet_0231 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase. (535 aa)
Sare_2098PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: stp:Strop_2713 4-hydroxyphenylacetate 3-hydroxylase. (525 aa)
egtDConserved hypothetical protein; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family. (321 aa)
Sare_2329PFAM: amine oxidase; KEGG: rrs:RoseRS_2594 amine oxidase. (503 aa)
Sare_2341TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; KEGG: stp:Strop_4374 glutamate decarboxylase; Belongs to the group II decarboxylase family. (466 aa)
Sare_2381Lysine 2,3-aminomutase; PFAM: Radical SAM domain protein; KEGG: stp:Strop_2262 radical SAM domain protein. (467 aa)
Sare_2382KEGG: stp:Strop_2263 hypothetical protein. (352 aa)
Sare_2383PFAM: Amidohydrolase 3; KEGG: stp:Strop_2264 amidohydrolase 3. (521 aa)
Sare_2384PFAM: D-Lysine 56-aminomutase alpha subunit; KEGG: stp:Strop_2265 hypothetical protein. (520 aa)
gcvPGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (939 aa)
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (126 aa)
Sare_2672PFAM: Phytanoyl-CoA dioxygenase; KEGG: stp:Strop_2489 phytanoyl-CoA dioxygenase. (309 aa)
Sare_2807KEGG: stp:Strop_2608 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (377 aa)
Sare_2812KEGG: stp:Strop_2613 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (387 aa)
Sare_2819KEGG: stp:Strop_2621 hypothetical protein. (389 aa)
Sare_2840KEGG: stp:Strop_2643 hypothetical protein. (352 aa)
Sare_2841KEGG: stp:Strop_2644 propanoyl-CoA C-acyltransferase. (392 aa)
Sare_2851PFAM: flavoprotein; KEGG: stp:Strop_2580 flavoprotein. (191 aa)
Sare_2952PFAM: methylaspartate mutase E subunit; KEGG: hal:VNG2288G MamB. (471 aa)
Sare_2958PFAM: fumarate lyase; KEGG: pap:PSPA7_1631 probable lyase. (471 aa)
Sare_3003PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sus:Acid_2667 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein. (419 aa)
Sare_3221PFAM: cyclase family protein; KEGG: stp:Strop_3004 cyclase family protein. (216 aa)
Sare_3279TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: stp:Strop_3053 amidohydrolase; Belongs to the peptidase M20A family. (402 aa)
Sare_3548TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: stp:Strop_3316 glycine cleavage system T protein. (374 aa)
Sare_3598KEGG: stp:Strop_3358 hypothetical protein. (198 aa)
Sare_3638PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: stp:Strop_3395 alcohol dehydrogenase GroES domain protein. (390 aa)
kmoKynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. (446 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (430 aa)
kynATryptophan 23-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. (298 aa)
Sare_3986PFAM: NAD-glutamate dehydrogenase; KEGG: stp:Strop_3605 NAD-glutamate dehydrogenase. (1685 aa)
Sare_3991KEGG: stp:Strop_3610 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)
Sare_4405KEGG: stp:Strop_4024 hypothetical protein. (402 aa)
Sare_4470TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: stp:Strop_4071 phenylacetate-CoA oxygenase, PaaI subunit. (253 aa)
Sare_4471TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: stp:Strop_4072 phenylacetate-CoA oxygenase, PaaH subunit. (106 aa)
Sare_4472TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: stp:Strop_4073 phenylacetate-CoA oxygenase, PaaG subunit. (351 aa)
Sare_4561PFAM: Phytanoyl-CoA dioxygenase; KEGG: ava:Ava_C0003 phytanoyl-CoA dioxygenase. (264 aa)
Sare_4686Fumarylacetoacetase; KEGG: stp:Strop_4256 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969. (398 aa)
Sare_4688PFAM: homogentisate 12-dioxygenase; Cupin 2 conserved barrel domain protein; KEGG: stp:Strop_4258 homogentisate 1,2-dioxygenase. (388 aa)
Sare_4704PFAM: amidohydrolase; Amidohydrolase 3; KEGG: stp:Strop_1522 amidohydrolase. (424 aa)
Sare_4892KEGG: stp:Strop_4418 hypothetical protein. (244 aa)
kmo-2Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. (454 aa)
Sare_4992KEGG: stp:Strop_4479 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)
arcAArginine deiminase; PFAM: amidinotransferase; KEGG: stp:Strop_4517 arginine deiminase. (436 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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