STRINGSTRING
Sare_1320 Sare_1320 Sare_1105 Sare_1105 Sare_1009 Sare_1009 Sare_1007 Sare_1007 Sare_1006 Sare_1006 Sare_0983 Sare_0983 Sare_1187 Sare_1187 Sare_0021 Sare_0021 Sare_0330 Sare_0330 Sare_0332 Sare_0332 pstB pstB Sare_0384 Sare_0384 Sare_0190 Sare_0190 Sare_0191 Sare_0191 Sare_0471 Sare_0471 Sare_0472 Sare_0472 Sare_0664 Sare_0664 Sare_0713 Sare_0713 Sare_0714 Sare_0714 Sare_4898 Sare_4898 Sare_4579 Sare_4579 Sare_4452 Sare_4452 Sare_4451 Sare_4451 hppA hppA Sare_4255 Sare_4255 atpB atpB atpE atpE atpF atpF atpH atpH atpA atpA atpG atpG atpD atpD atpC atpC Sare_3607 Sare_3607 Sare_3532 Sare_3532 Sare_3531 Sare_3531 Sare_3527 Sare_3527 Sare_3526 Sare_3526 Sare_3524 Sare_3524 Sare_3452 Sare_3452 Sare_3142 Sare_3142 cbiM cbiM cbiN cbiN Sare_2790 Sare_2790 crcB-2 crcB-2 crcB crcB Sare_2564 Sare_2564 nhaA3 nhaA3 Sare_2295 Sare_2295 nhaA2 nhaA2 Sare_1837 Sare_1837 nhaA1 nhaA1 Sare_1631 Sare_1631 Sare_1451 Sare_1451 Sare_1450 Sare_1450
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_1320PFAM: protein of unknown function DUF125 transmembrane; KEGG: stp:Strop_1363 protein of unknown function DUF125, transmembrane. (237 aa)
Sare_1105TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: stp:Strop_1212 ATPase, P-type (transporting), HAD superfamily, subfamily IC. (902 aa)
Sare_1009Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (253 aa)
Sare_1007KEGG: stp:Strop_1117 hypothetical protein. (130 aa)
Sare_1006PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: stp:Strop_1116 cobalamin (vitamin B12) biosynthesis CbiM protein. (238 aa)
Sare_0983Cytochrome c oxidase subunit I type; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (585 aa)
Sare_1187TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: stp:Strop_1298 ammonium transporter. (478 aa)
Sare_0021TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: stp:Strop_0017 ATPase, P-type (transporting), HAD superfamily, subfamily IC. (1512 aa)
Sare_0330TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: stp:Strop_0286 phosphate binding protein. (318 aa)
Sare_0332TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_0288 phosphate ABC transporter, inner membrane subunit PstA. (307 aa)
pstBPhosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (306 aa)
Sare_0384PFAM: protein of unknown function DUF540; KEGG: stp:Strop_0322 protein of unknown function DUF540. (280 aa)
Sare_0190KEGG: stp:Strop_0175 nitrate/nitrite transporter-like protein. (471 aa)
Sare_0191PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_0176 major facilitator superfamily MFS_1. (472 aa)
Sare_0471KEGG: stp:Strop_0403 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (646 aa)
Sare_0472KEGG: stp:Strop_0404 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (503 aa)
Sare_0664MgtE intracellular region; PFAM: CBS domain containing protein; MgtE intracellular region; KEGG: stp:Strop_0717 MgtE intracellular region. (427 aa)
Sare_0713NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: stp:Strop_0771 NADH dehydrogenase (quinone). (621 aa)
Sare_0714KEGG: stp:Strop_0772 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (496 aa)
Sare_4898PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_4423 ABC transporter related. (210 aa)
Sare_4579TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sen:SACE_2467 cation-transporting ATPase. (906 aa)
Sare_4452KEGG: stp:Strop_4054 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I). (651 aa)
Sare_4451KEGG: stp:Strop_4053 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (510 aa)
hppAV-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. (782 aa)
Sare_4255TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_3865 nitrite transporter. (456 aa)
atpBATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (265 aa)
atpEH+transporting two-sector ATPase C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (77 aa)
atpFATP synthase F0, B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (179 aa)
atpHATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (274 aa)
atpAATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (550 aa)
atpGATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (309 aa)
atpDATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (485 aa)
atpCH+transporting two-sector ATPase delta/epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (94 aa)
Sare_3607PFAM: protein of unknown function DUF1211; KEGG: stp:Strop_3367 protein of unknown function DUF1211. (229 aa)
Sare_3532Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (323 aa)
Sare_3531Cytochrome-c oxidase; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. (141 aa)
Sare_3527PFAM: cytochrome c oxidase subunit III; KEGG: stp:Strop_3295 cytochrome c oxidase, subunit III. (199 aa)
Sare_3526PFAM: cytochrome c class I; KEGG: stp:Strop_3294 cytochrome c, class I. (277 aa)
Sare_3524PFAM: Cytochrome b/b6 domain; KEGG: stp:Strop_3292 cytochrome b/b6, N-terminal domain. (536 aa)
Sare_3452TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: rrs:RoseRS_2096 monovalent cation/proton antiporter, MnhG/PhaG subunit. (118 aa)
Sare_3142PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO0213 putative nitrate/nitrite transporter protein. (401 aa)
cbiMCobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (226 aa)
cbiNCobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (105 aa)
Sare_2790Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (305 aa)
crcB-2CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (119 aa)
crcBCamphor resistance CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (169 aa)
Sare_2564PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: stp:Strop_2413 ion transport 2 domain protein. (268 aa)
nhaA3Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. (451 aa)
Sare_2295Cytochrome c oxidase subunit I type; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (666 aa)
nhaA2Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. (436 aa)
Sare_1837PFAM: sodium/hydrogen exchanger; KEGG: stp:Strop_1844 sodium/hydrogen exchanger. (412 aa)
nhaA1Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; In the N-terminal section; belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. (652 aa)
Sare_1631Sulphate transporter; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: stp:Strop_1646 sulphate transporter. (499 aa)
Sare_1451PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: stp:Strop_1486 TrkA-N domain protein. (221 aa)
Sare_1450PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: stp:Strop_1485 TrkA-N domain protein. (229 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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