STRINGSTRING
Sare_1972 Sare_1972 Sare_2577 Sare_2577 Sare_2575 Sare_2575 Sare_2574 Sare_2574 Sare_2573 Sare_2573 Sare_1976 Sare_1976 Sare_1974 Sare_1974 Sare_1973 Sare_1973
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_1972TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1; KEGG: tfu:Tfu_1592 hypothetical protein. (495 aa)
Sare_2577TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: nfa:nfa44230 hypothetical protein. (227 aa)
Sare_2575TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CRISPR-associated protein CT1975; KEGG: tfu:Tfu_1598 CRISPR-associated CT1975 family protein. (387 aa)
Sare_2574TIGRFAM: CRISPR-associated protein, Cse2 family; PFAM: CRISPR-associated protein Cse2; KEGG: tfu:Tfu_1599 hypothetical protein. (226 aa)
Sare_2573TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1; KEGG: tfu:Tfu_1600 hypothetical protein. (560 aa)
Sare_1976TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: sma:SAV7538 hypothetical protein. (206 aa)
Sare_1974TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CRISPR-associated protein CT1975; KEGG: sma:SAV7540 hypothetical protein. (380 aa)
Sare_1973KEGG: tfu:Tfu_1591 hypothetical protein. (220 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.