STRINGSTRING
Sare_1025 Sare_1025 Sare_1212 Sare_1212 Sare_1590 Sare_1590 priA priA Sare_1924 Sare_1924 Sare_1926 Sare_1926 Sare_1969 Sare_1969 Sare_2581 Sare_2581 Sare_2855 Sare_2855 Sare_3161 Sare_3161 Sare_3336 Sare_3336 Sare_3729 Sare_3729 Sare_3780 Sare_3780 dnaG dnaG Sare_4925 Sare_4925 Sare_5064 Sare_5064
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_1025PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sen:SACE_2604 transposase, ISlxx1. (262 aa)
Sare_1212KEGG: sen:SACE_7030 possible phiRv2 prophage protein. (410 aa)
Sare_1590PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sen:SACE_2604 transposase, ISlxx1. (262 aa)
priAConserved hypothetical protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (625 aa)
Sare_1924KEGG: pna:Pnap_0963 hypothetical protein. (616 aa)
Sare_1926PFAM: Bifunctional DNA primase/polymerase; KEGG: stp:Strop_0062 hypothetical protein. (377 aa)
Sare_1969PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sen:SACE_2604 transposase, ISlxx1. (262 aa)
Sare_2581PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sen:SACE_2604 transposase, ISlxx1. (262 aa)
Sare_2855PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sen:SACE_2604 transposase, ISlxx1. (262 aa)
Sare_3161PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sen:SACE_2604 transposase, ISlxx1. (262 aa)
Sare_3336KEGG: stp:Strop_3105 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases. (616 aa)
Sare_3729TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: sco:SCP1.196 putative dna primase/helicase. (874 aa)
Sare_3780TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: sco:SCP1.196 putative dna primase/helicase. (874 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (627 aa)
Sare_4925PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sen:SACE_2604 transposase, ISlxx1. (262 aa)
Sare_5064Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (844 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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