STRINGSTRING
dnaK dnaK Sare_0172 Sare_0172 Sare_0878 Sare_0878 Sare_1295 Sare_1295 Sare_1636 Sare_1636 Sare_1937 Sare_1937 Sare_2386 Sare_2386 Sare_2740 Sare_2740 Sare_2949 Sare_2949 glyQS glyQS Sare_4000 Sare_4000 Sare_4006 Sare_4006
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dnaKChaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (611 aa)
Sare_0172PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: stp:Strop_0163 3-hydroxybutyryl-CoA dehydrogenase. (285 aa)
Sare_0878PFAM: thioesterase superfamily protein; KEGG: stp:Strop_0936 thioesterase superfamily protein. (172 aa)
Sare_1295PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: stp:Strop_1345 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. (233 aa)
Sare_1636PFAM: Heat shock protein 70; KEGG: stp:Strop_1651 heat shock protein 70. (632 aa)
Sare_1937KEGG: sen:SACE_6784 molecular chaperone. (245 aa)
Sare_2386KEGG: stp:Strop_2267 hypothetical protein. (130 aa)
Sare_2740PFAM: Pyridoxal-dependent decarboxylase; KEGG: stp:Strop_2551 pyridoxal-dependent decarboxylase. (530 aa)
Sare_2949PFAM: Pyridoxal-dependent decarboxylase; KEGG: fra:Francci3_4055 pyridoxal-dependent decarboxylase. (502 aa)
glyQSglycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. (459 aa)
Sare_4000PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: stp:Strop_3618 3-hydroxybutyryl-CoA dehydrogenase. (595 aa)
Sare_4006PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: stp:Strop_3624 3-hydroxybutyryl-CoA dehydrogenase. (282 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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