STRINGSTRING
Sare_4150 Sare_4150 Sare_0575 Sare_0575 Sare_1706 Sare_1706 Sare_2713 Sare_2713 Sare_2826 Sare_2826 Sare_2883 Sare_2883 Sare_2884 Sare_2884 Sare_4715 Sare_4715
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_4150PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_3768 succinate dehydrogenase. (637 aa)
Sare_0575PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: bxe:Bxe_C0508 putative dehydrogenase flavoprotein. (543 aa)
Sare_1706KEGG: stp:Strop_1709 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (643 aa)
Sare_2713PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: stp:Strop_2532 fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (551 aa)
Sare_2826PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_2629 fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (549 aa)
Sare_2883PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_2675 fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (530 aa)
Sare_2884PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_2676 fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (557 aa)
Sare_4715L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (572 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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