STRINGSTRING
Sare_2734 Sare_2734 Sare_1429 Sare_1429 Sare_2551 Sare_2551 Sare_2630 Sare_2630 Sare_2731 Sare_2731 Sare_4657 Sare_4657
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_2734PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: stp:Strop_2547 ABC transporter related. (354 aa)
Sare_1429PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: fra:Francci3_1590 ABC transporter related; Belongs to the ABC transporter superfamily. (350 aa)
Sare_2551PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: stp:Strop_2402 ABC transporter related. (347 aa)
Sare_2630PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: stp:Strop_2005 ABC transporter related; Belongs to the ABC transporter superfamily. (378 aa)
Sare_2731TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein MerR; TOBE domain protein; KEGG: stp:Strop_2544 DNA binding domain, excisionase family. (141 aa)
Sare_4657PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: stp:Strop_4220 ABC transporter related. (363 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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