STRINGSTRING
Sare_2039 Sare_2039 Sare_2100 Sare_2100 Sare_2122 Sare_2122 Sare_2181 Sare_2181 Sare_2187 Sare_2187 glyA glyA Sare_2337 Sare_2337 Sare_2452 Sare_2452 gcvP gcvP Sare_2660 Sare_2660 Sare_2740 Sare_2740 Sare_2784 Sare_2784 Sare_2920 Sare_2920 Sare_2945 Sare_2945 Sare_2949 Sare_2949 Sare_2960 Sare_2960 Sare_3184 Sare_3184 Sare_3215 Sare_3215 Sare_3306 Sare_3306 Sare_3410 Sare_3410 hisC hisC Sare_3482 Sare_3482 Sare_3533 Sare_3533 kynU kynU Sare_3922 Sare_3922 Sare_4053 Sare_4053 Sare_4140 Sare_4140 Sare_4251 Sare_4251 hemL hemL Sare_1265 Sare_1265 Sare_4941 Sare_4941 Sare_4945 Sare_4945 Sare_4999 Sare_4999 Sare_5101 Sare_5101 Sare_1264 Sare_1264 Sare_1255 Sare_1255 Sare_1158 Sare_1158 Sare_1106 Sare_1106 Sare_0892 Sare_0892 Sare_0863 Sare_0863 Sare_0569 Sare_0569 Sare_0510 Sare_0510 Sare_0460 Sare_0460 Sare_0354 Sare_0354 Sare_0318 Sare_0318 pat pat Sare_1519 Sare_1519 Sare_1683 Sare_1683 Sare_1756 Sare_1756 Sare_1785 Sare_1785 bioA bioA argD argD Sare_2034 Sare_2034
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_2039PFAM: aminotransferase class V; KEGG: aav:Aave_1124 aminotransferase, class V. (460 aa)
Sare_2100PFAM: aminotransferase class-III; KEGG: acr:Acry_0545 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (461 aa)
Sare_2122Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (435 aa)
Sare_2181Cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ade:Adeh_3707 cystathionine gamma-synthase. (378 aa)
Sare_2187PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ade:Adeh_0846 cysteine desulfurase, SufS subfamily. (422 aa)
glyAGlycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (478 aa)
Sare_2337PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gur:Gura_4276 glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family. (373 aa)
Sare_2452PFAM: aminotransferase class I and II; KEGG: stp:Strop_2329 aminotransferase, class I and II. (386 aa)
gcvPGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (939 aa)
Sare_2660Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: stp:Strop_2477 aminotransferase, class I and II. (439 aa)
Sare_2740PFAM: Pyridoxal-dependent decarboxylase; KEGG: stp:Strop_2551 pyridoxal-dependent decarboxylase. (530 aa)
Sare_2784PFAM: aminotransferase class I and II; KEGG: stp:Strop_2586 aminotransferase, class I and II. (421 aa)
Sare_2920PFAM: aminotransferase class I and II; KEGG: stp:Strop_1720 aminotransferase, class I and II. (413 aa)
Sare_2945PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: pth:PTH_2574 predicted pyridoxal phosphate-dependent enzyme; Belongs to the DegT/DnrJ/EryC1 family. (378 aa)
Sare_2949PFAM: Pyridoxal-dependent decarboxylase; KEGG: fra:Francci3_4055 pyridoxal-dependent decarboxylase. (502 aa)
Sare_2960PFAM: aminotransferase class-III; KEGG: sco:SCO3622 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (457 aa)
Sare_31848-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: stp:Strop_1724 8-amino-7-oxononanoate synthase. (514 aa)
Sare_3215PFAM: aminotransferase class-III; KEGG: stp:Strop_2993 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (436 aa)
Sare_3306TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: stp:Strop_3079 cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (434 aa)
Sare_3410Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: stp:Strop_3184 regulatory protein GntR, HTH. (485 aa)
hisCTIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: stp:Strop_3195 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (358 aa)
Sare_3482Threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: stp:Strop_3255 threonine aldolase. (343 aa)
Sare_3533Cysteine desulfurase; PFAM: aminotransferase class V; KEGG: stp:Strop_3301 aminotransferase, class V. (383 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (430 aa)
Sare_3922PFAM: aminotransferase class I and II; KEGG: stp:Strop_3547 aminotransferase, class I and II. (366 aa)
Sare_4053TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: stp:Strop_3677 ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (404 aa)
Sare_4140PFAM: aminotransferase class I and II; KEGG: stp:Strop_3758 aminotransferase, class I and II. (368 aa)
Sare_4251Aminotransferase class I and II; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: stp:Strop_3861 aminotransferase, class I and II. (397 aa)
hemLTIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: stp:Strop_4100 glutamate-1-semialdehyde-2,1-aminomutase. (444 aa)
Sare_1265PFAM: aminotransferase class-III; KEGG: bcy:Bcer98_1682 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (449 aa)
Sare_4941Adenosylmethionine--8-amino-7-oxononanoate transaminase; PFAM: aminotransferase class-III; KEGG: ace:Acel_1287 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (452 aa)
Sare_4945PFAM: aminotransferase class-III; KEGG: bms:BRA1166 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (439 aa)
Sare_4999Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: stp:Strop_4485 aminotransferase, class I and II. (364 aa)
Sare_5101Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: stp:Strop_4583 aminotransferase, class I and II. (437 aa)
Sare_1264DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: sus:Acid_2248 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (435 aa)
Sare_1255Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: fal:FRAAL0914 3-amino-5-hydroxybenzoic acid synthase; Belongs to the DegT/DnrJ/EryC1 family. (388 aa)
Sare_1158PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: stp:Strop_1267 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme. (373 aa)
Sare_1106PFAM: aminotransferase class V; KEGG: stp:Strop_1213 aminotransferase, class V. (391 aa)
Sare_0892PFAM: aminotransferase class-III; KEGG: stp:Strop_0950 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (448 aa)
Sare_0863Cystathionine gamma-synthase; PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: stp:Strop_0920 cystathionine gamma-synthase. (380 aa)
Sare_0569PFAM: aminotransferase class-III; KEGG: rpd:RPD_2366 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (435 aa)
Sare_0510Putative phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (375 aa)
Sare_0460PFAM: aminotransferase class V; Pyridoxal-dependent decarboxylase; KEGG: stp:Strop_0389 pyridoxal-dependent decarboxylase. (500 aa)
Sare_0354Diaminobutyrate--2-oxoglutarate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (430 aa)
Sare_0318Cysteine desulfurase; PFAM: aminotransferase class V; KEGG: stp:Strop_0275 aminotransferase, class V. (414 aa)
patHistidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (367 aa)
Sare_15198-amino-7-oxononanoate synthase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: stp:Strop_1570 8-amino-7-oxononanoate synthase. (378 aa)
Sare_1683Glutamine--scyllo-inositol transaminase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: stp:Strop_1688 glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family. (369 aa)
Sare_1756TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: stp:Strop_1769 cysteine desulfurase family protein. (403 aa)
Sare_1785PFAM: aminotransferase class V; KEGG: stp:Strop_1799 aminotransferase, class V. (347 aa)
bioAAdenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. (425 aa)
argDTIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class-III; KEGG: stp:Strop_1891 acetylornithine and succinylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (429 aa)
Sare_2034PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mth:MTH1188 pleiotropic regulatory protein DegT; Belongs to the DegT/DnrJ/EryC1 family. (376 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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